Sustainpine_db
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Assembly Name: biogeco3 v1.0

Name: Transcription factor, MADS-box

Term: IPR002100  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog3_v1.0_unigene232 biogeco3 v1.0 534
AutoFact: MADS-box transcription factor n=3 Tax=Picea abies RepID=Q9SED8_PICAB 0.0
FL-Next: tr=MADS-box transcription factor; Picea abies (Norway spruce) (Picea excelsa). 0.0
Blast2go: b-class mads-box transcription factor 0.0
C-terminus
biog3_v1.0_unigene242 biogeco3 v1.0 399
AutoFact: Unassigned protein
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: protein 0.0
Putative N-terminus
biog3_v1.0_unigene2040 biogeco3 v1.0 426
AutoFact: Putative MADS box transcription factor PrMADS5 n=1 Tax=Pinus radiata RepID=O24489_PINRA 0.0
Blast2go: mads box transcription factor 5 0.0
unknown
biog3_v1.0_unigene3324 biogeco3 v1.0 463
AutoFact: putative LRR receptor-like serine/threonine-protein kinase RKF3 [Arabidopsis thaliana] sp|P93050.1|RKF3_ARATH RecName: Full=Probable LRR receptor-like serine/threonine-protein kinase RKF3; AltName: Full=Receptor-like kinase in flowers 3; Flags: Precursor 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: probable lrr receptor-like serine threonine-protein kinase rkf3-like 0.0
Internal
biog3_v1.0_unigene5007 biogeco3 v1.0 254
AutoFact: Putative MADS box transcription factor PrMADS9 n=1 Tax=Pinus radiata RepID=O24487_PINRA 0.0
FL-Next: tr=Putative MADS box transcription factor PrMADS9; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
Blast2go: mads box transcription factor 9 0.0
Internal
biog3_v1.0_unigene6235 biogeco3 v1.0 558
AutoFact: MADS-box protein n=3 Tax=Pinaceae RepID=O04406_PINRA 0.0
FL-Next: tr=MADS-box protein; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
Blast2go: mads-box protein 0.0
C-terminus
biog3_v1.0_unigene7109 biogeco3 v1.0 866
AutoFact: MADS-box protein n=3 Tax=Pinaceae RepID=O04406_PINRA 0.0
FL-Next: tr=MADS-box protein; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
Blast2go: mads-box protein 0.0
N-terminus
biog3_v1.0_unigene9286 biogeco3 v1.0 238
AutoFact: DEF/GLO-like protein n=1 Tax=Pinus radiata RepID=Q9M7M7_PINRA 2.0e-18
FL-Next: tr=DEF/GLO-like protein; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
Blast2go: af120097_1def glo-like protein 4.07704e-22
Internal
biog3_v1.0_unigene9537 biogeco3 v1.0 204
AutoFact: Transporter ATM1, mitochondrial, putative n=1 Tax=Ricinus communis RepID=B9T3V9_RICCO 7.00649e-45
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: abc transporter family of the mitochondria family 0.0
Internal
biog3_v1.0_unigene12130 biogeco3 v1.0 1062
AutoFact: MADS-box protein n=7 Tax=Pinaceae RepID=A0S6W4_9CONI 0.0
FL-Next: tr=MADS box transcription factor; Pinus resinosa (Red pine) (Norway pine). 0.0
Blast2go: mads-box transcription factor 0.0
Complete
biog3_v1.0_unigene12225 biogeco3 v1.0 824
AutoFact: Serine hydroxymethyltransferase n=2 Tax=Picea sitchensis RepID=A9NUX0_PICSI 0.0
FL-Next: sp=Serine hydroxymethyltransferase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: serine hydroxymethyltransferase 0.0
C-terminus
biog3_v1.0_unigene14796 biogeco3 v1.0 475
AutoFact: AGL15 n=1 Tax=Glycine max RepID=Q67BK3_SOYBN 1.0e-15
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: agl11 5.91526e-19
N-terminus
biog3_v1.0_unigene16743 biogeco3 v1.0 172
AutoFact: Putative MADS box transcription factor PrMADS6 n=2 Tax=Pinus radiata RepID=O24490_PINRA 0.0
FL-Next: tr=Putative MADS box transcription factor PrMADS6; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
Blast2go: mads-box protein soc1-like 0.0
Internal
biog3_v1.0_unigene17250 biogeco3 v1.0 245
AutoFact: Putative MADS box transcription factor PrMADS5 n=1 Tax=Pinus radiata RepID=O24489_PINRA 0.0
FL-Next: tr=Putative MADS box transcription factor PrMADS5; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
Blast2go: mads box transcription factor 5 0.0
Internal
biog3_v1.0_unigene18784 biogeco3 v1.0 262
AutoFact: putative receptor ser/thr protein [Oryza sativa Japonica Group] gb|ABF95119.1| Protein kinase domain containing protein, expressed [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: leucine-rich repeat family protein protein kinase family protein 0.0
Internal
biog3_v1.0_unigene18989 biogeco3 v1.0 305
AutoFact: MADS-box protein JOINTLESS (Fragment) n=1 Tax=Picea abies RepID=B2KZI9_PICAB 5.0e-18
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: mads-box protein jointless 1.80394e-23
Putative N-terminus
biog3_v1.0_unigene19570 biogeco3 v1.0 169
AutoFact: MADS-box transcription factor GbMADS3 n=1 Tax=Ginkgo biloba RepID=Q58A80_GINBI 0.0
Blast2go: mads-box transcription factor 3 0.0
unknown
biog3_v1.0_unigene19912 biogeco3 v1.0 128
AutoFact: MADS-box transcription factor GbMADS3 n=1 Tax=Ginkgo biloba RepID=Q58A80_GINBI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: mads-box transcription factor 3 0.0
Internal
biog3_v1.0_unigene20126 biogeco3 v1.0 122
AutoFact: MADS-box transcription factor n=3 Tax=Picea abies RepID=Q9SED8_PICAB 0.0
Blast2go: b-class mads-box transcription factor 0.0
unknown
biog3_v1.0_unigene21097 biogeco3 v1.0 235
AutoFact: Serine hydroxymethyltransferase n=2 Tax=Picea sitchensis RepID=A9NUX0_PICSI 0.0
FL-Next: sp=Serine hydroxymethyltransferase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: serine hydroxymethyltransferase 0.0
Putative C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain