Sustainpine_db
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Assembly Name: biogeco3 v1.0

Name: Cytochrome c domain

Term: IPR009056  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog3_v1.0_unigene429 biogeco3 v1.0 677
AutoFact: Serine hydroxymethyltransferase (Fragment) n=2 Tax=Vitis vinifera RepID=D7SZT0_VITVI 0.0
FL-Next: sp=Serine hydroxymethyltransferase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: serine hydroxymethyltransferase 0.0
Internal
biog3_v1.0_unigene2199 biogeco3 v1.0 672
AutoFact: CBS / octicosapeptide/Phox/Bemp1 domain-containing protein [Arabidopsis thaliana] ref|NP_001190074.1| CBS / octicosapeptide/Phox/Bemp1 domain-containing protein [Arabidopsis thaliana] emb|CAB86899.1| putative protein [Arabidopsis thaliana] gb|AEE79016.1| 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Putative Complete
biog3_v1.0_unigene4190 biogeco3 v1.0 270
AutoFact: Cytochrome c n=1 Tax=Ginkgo biloba RepID=CYC_GINBI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
N-terminus
biog3_v1.0_unigene5682 biogeco3 v1.0 729
AutoFact: CBS / octicosapeptide/Phox/Bemp1 domain-containing protein [Arabidopsis thaliana] ref|NP_001190074.1| CBS / octicosapeptide/Phox/Bemp1 domain-containing protein [Arabidopsis thaliana] emb|CAB86899.1| putative protein [Arabidopsis thaliana] gb|AEE79016.1| 0.0
FL-Next: Isoform 2 of CBS domain-containing protein CBSCBSPB4 OS=Arabidopsis thaliana GN=CBSCBSPB4 0.0
Blast2go: cbs domain-containing protein cbscbspb3-like 0.0
C-terminus
biog3_v1.0_unigene5995 biogeco3 v1.0 464
AutoFact: thiol oxidoreductase1 [Zea mays] gb|AAW66880.1| thiol oxidoreductase [Zea mays] gb|ACN27863.1| unknown [Zea mays] 0.0
FL-Next: sp=Sulfhydryl oxidase 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: quiescin-sulfhydryl oxidase 2 0.0
Internal
biog3_v1.0_unigene6642 biogeco3 v1.0 251
AutoFact: Protein CASP, putative n=1 Tax=Ricinus communis RepID=B9RE25_RICCO 0.0
FL-Next: sp=Protein CASP; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein casp 0.0
Internal
biog3_v1.0_unigene8813 biogeco3 v1.0 348
AutoFact: Protein CASP, putative n=1 Tax=Ricinus communis RepID=B9RE25_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein casp 0.0
N-terminus
biog3_v1.0_unigene9322 biogeco3 v1.0 358
AutoFact: CBS / octicosapeptide/Phox/Bemp1 domain-containing protein [Arabidopsis thaliana] ref|NP_001190074.1| CBS / octicosapeptide/Phox/Bemp1 domain-containing protein [Arabidopsis thaliana] emb|CAB86899.1| putative protein [Arabidopsis thaliana] gb|AEE79016.1| 0.0
FL-Next: sp=CBS domain-containing protein CBSCBSPB3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: cbs domain-containing protein cbscbspb3-like 0.0
Internal
biog3_v1.0_unigene10127 biogeco3 v1.0 746
AutoFact: CBS / octicosapeptide/Phox/Bemp1 domain-containing protein [Arabidopsis thaliana] ref|NP_001190074.1| CBS / octicosapeptide/Phox/Bemp1 domain-containing protein [Arabidopsis thaliana] emb|CAB86899.1| putative protein [Arabidopsis thaliana] gb|AEE79016.1| 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Putative C-terminus
biog3_v1.0_unigene10455 biogeco3 v1.0 313
AutoFact: thiol oxidoreductase1 [Zea mays] gb|AAW66880.1| thiol oxidoreductase [Zea mays] gb|ACN27863.1| unknown [Zea mays] 0.0
FL-Next: sp=Sulfhydryl oxidase 1; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: quiescin-sulfhydryl oxidase 2 0.0
Internal
biog3_v1.0_unigene11594 biogeco3 v1.0 1188
AutoFact: cytochrome c1 precursor [Solanum tuberosum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: cytochrome c1- heme mitochondrial-like 0.0
C-terminus
biog3_v1.0_unigene12225 biogeco3 v1.0 824
AutoFact: Serine hydroxymethyltransferase n=2 Tax=Picea sitchensis RepID=A9NUX0_PICSI 0.0
FL-Next: sp=Serine hydroxymethyltransferase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: serine hydroxymethyltransferase 0.0
C-terminus
biog3_v1.0_unigene13894 biogeco3 v1.0 411
AutoFact: CBS / octicosapeptide/Phox/Bemp1 domain-containing protein [Arabidopsis thaliana] ref|NP_001190074.1| CBS / octicosapeptide/Phox/Bemp1 domain-containing protein [Arabidopsis thaliana] emb|CAB86899.1| putative protein [Arabidopsis thaliana] gb|AEE79016.1| 0.0
Blast2go: protein 0.0
Putative coding
biog3_v1.0_unigene15923 biogeco3 v1.0 1407
AutoFact: cytochrome c1 precursor [Solanum tuberosum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: cytochrome c1- heme mitochondrial-like 0.0
Complete
biog3_v1.0_unigene16702 biogeco3 v1.0 427
AutoFact: Protein CASP, putative n=1 Tax=Ricinus communis RepID=B9RE25_RICCO 0.0
FL-Next: sp=Protein CASP; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein casp 0.0
Putative C-terminus
biog3_v1.0_unigene18289 biogeco3 v1.0 123
AutoFact: Cytochrome c n=1 Tax=Ginkgo biloba RepID=CYC_GINBI 0.0
Blast2go: protein 0.0
unknown
biog3_v1.0_unigene21097 biogeco3 v1.0 235
AutoFact: Serine hydroxymethyltransferase n=2 Tax=Picea sitchensis RepID=A9NUX0_PICSI 0.0
FL-Next: sp=Serine hydroxymethyltransferase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: serine hydroxymethyltransferase 0.0
Putative C-terminus
biog3_v1.0_unigene22399 biogeco3 v1.0 278
AutoFact: Cytochrome c n=1 Tax=Ginkgo biloba RepID=CYC_GINBI 0.0
Blast2go: protein 0.0
unknown
biog3_v1.0_unigene22973 biogeco3 v1.0 458
AutoFact: Serine hydroxymethyltransferase n=2 Tax=Picea sitchensis RepID=A9NUX0_PICSI 0.0
Blast2go: serine hydroxymethyltransferase 0.0
unknown
biog3_v1.0_unigene23853 biogeco3 v1.0 276
AutoFact: thiol oxidoreductase1 [Zea mays] gb|AAW66880.1| thiol oxidoreductase [Zea mays] gb|ACN27863.1| unknown [Zea mays] 0.0
Blast2go: quiescin-sulfhydryl oxidase 2 0.0
Putative coding

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain