Sustainpine_db
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Assembly Name: biogeco3 v1.0

Name: Protein translocase complex, SecE/Sec61-gamma subunit

Term: IPR001901  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
biog3_v1.0_unigene2852 biogeco3 v1.0 331
• AutoFact: cullin 1C [Nicotiana tabacum] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
Putative C-terminus
biog3_v1.0_unigene3434 biogeco3 v1.0 574
• AutoFact: cullin-like protein1 [Pisum sativum] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
N-terminus
biog3_v1.0_unigene4380 biogeco3 v1.0 255
• AutoFact: cullin 1C [Nicotiana tabacum] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
Internal
biog3_v1.0_unigene4490 biogeco3 v1.0 313
• AutoFact: Gypsy/Ty-3 retroelement polyprotein; 69905-74404 n=1 Tax=Arabidopsis thaliana RepID=Q9LHM4_ARATH 0.0
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Blast2go: retrotransposon unclassified 0.0
Internal
biog3_v1.0_unigene6180 biogeco3 v1.0 669
• AutoFact: AP2/B3 domain-containing transcription factor [Arabidopsis thaliana] sp|Q1G3M3.1|Y3918_ARATH RecName: Full=B3 domain-containing protein At3g19184 gb|ABF59230.1| unknown protein [Arabidopsis thaliana] dbj|BAH30459.1| hypothetical protein [Arabidopsis thali 4.06377e-44
• FL-Next: sp=B3 domain-containing protein Os06g0194400; Oryza sativa subsp. japonica (Rice). 0.0
• Blast2go: dna binding protein 0.0
C-terminus
biog3_v1.0_unigene7273 biogeco3 v1.0 304
• AutoFact: AP2/B3 domain-containing transcription factor [Arabidopsis thaliana] sp|Q1G3M3.1|Y3918_ARATH RecName: Full=B3 domain-containing protein At3g19184 gb|ABF59230.1| unknown protein [Arabidopsis thaliana] dbj|BAH30459.1| hypothetical protein [Arabidopsis thali 4.06377e-44
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Blast2go: dna binding protein 0.0
N-terminus
biog3_v1.0_unigene7595 biogeco3 v1.0 1292
• AutoFact: Tyrosyl-tRNA synthetase n=3 Tax=Zea mays RepID=B6T638_MAIZE 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: tyrosyl-trna synthetase 0.0
C-terminus
biog3_v1.0_unigene8596 biogeco3 v1.0 306
• AutoFact: Tyrosyl-tRNA synthetase n=3 Tax=Zea mays RepID=B6T638_MAIZE 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: tyrosyl-trna synthetase 0.0
N-terminus
biog3_v1.0_unigene8930 biogeco3 v1.0 223
• AutoFact: cullin-like protein1 [Pisum sativum] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
Internal
biog3_v1.0_unigene10228 biogeco3 v1.0 204
• AutoFact: adenosine-deaminase family/editase family protein [Arabidopsis thaliana] 3.0e-20
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Blast2go: adenosine trna-specific 1 2.67521e-28
Internal
biog3_v1.0_unigene11073 biogeco3 v1.0 919
• AutoFact: RNA-directed DNA polymerase (Reverse transcriptase); Chromo; Zinc finger, CCHC-type; Peptidase aspartic, active site; Polynucleotidyl transferase, Ribonuclease H fold n=1 Tax=Medicago truncatula RepID=A2Q2C7_MEDTR 0.0
• FL-Next: sp=Uncharacterized mitochondrial protein AtMg00860; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion. 0.0
• Blast2go: rna-directed dna polymerase (reverse transcriptase) chromo zinc cchc-type peptidase active site polynucleotidyl ribonuclease h fold 0.0
Putative Complete
biog3_v1.0_unigene11408 biogeco3 v1.0 475
• AutoFact: Gypsy/Ty-3 retroelement polyprotein; 69905-74404 n=1 Tax=Arabidopsis thaliana RepID=Q9LHM4_ARATH 0.0
• Blast2go: retrotransposon unclassified 0.0
unknown
biog3_v1.0_unigene13106 biogeco3 v1.0 463
• AutoFact: Gypsy/Ty-3 retroelement polyprotein; 69905-74404 n=1 Tax=Arabidopsis thaliana RepID=Q9LHM4_ARATH 0.0
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Blast2go: retrotransposon unclassified 0.0
Internal
biog3_v1.0_unigene14063 biogeco3 v1.0 164
• AutoFact: cullin 1C [Nicotiana tabacum] 0.0
• Blast2go: protein 0.0
unknown
biog3_v1.0_unigene14193 biogeco3 v1.0 300
• AutoFact: Predicted protein n=3 Tax=Physcomitrella patens subsp. patens RepID=A9RDX1_PHYPA 2.0e-20
• Blast2go: protein transport protein sec61 gamma subunit 2.04069e-28
unknown
biog3_v1.0_unigene16164 biogeco3 v1.0 390
• AutoFact: 1-deoxy-D-xylulose 5-phosphate synthase type II n=3 Tax=Pinaceae RepID=A7LA01_PICAB 0.0
• FL-Next: tr=Putative 1-D-deoxyxylulose 5-phosphate synthase type 2; Pinus densiflora (Japanese red pine). 0.0
• Blast2go: 1-deoxy-d-xylulose 5-phosphate synthase 0.0
Internal
biog3_v1.0_unigene16913 biogeco3 v1.0 361
• AutoFact: Gypsy/Ty-3 retroelement polyprotein; 69905-74404 n=1 Tax=Arabidopsis thaliana RepID=Q9LHM4_ARATH 0.0
• FL-Next: tr=Gypsy/Ty-3 retroelement polyprotein; 69905-74404; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: retrotransposon protein 0.0
Internal
biog3_v1.0_unigene17126 biogeco3 v1.0 256
• AutoFact: Gypsy/Ty-3 retroelement polyprotein; 69905-74404 n=1 Tax=Arabidopsis thaliana RepID=Q9LHM4_ARATH 0.0
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Blast2go: retrotransposon unclassified 0.0
Internal
biog3_v1.0_unigene18284 biogeco3 v1.0 364
• AutoFact: reverse transcriptase [Cycas revoluta] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: reverse transcriptase 0.0
Putative Complete
biog3_v1.0_unigene19528 biogeco3 v1.0 260
• AutoFact: Gypsy/Ty-3 retroelement polyprotein; 69905-74404 n=1 Tax=Arabidopsis thaliana RepID=Q9LHM4_ARATH 0.0
• Blast2go: retrotransposon unclassified 0.0
Putative coding

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain