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Assembly Name: biogeco3 v1.0

Name: BRCT domain

Term: IPR001357  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog3_v1.0_unigene18869 biogeco3 v1.0 161
AutoFact: Unassigned protein
FL-Next: tr=N-acetyltransferase, putative; Ricinus communis (Castor bean). 0.0
Blast2go: sdl-1 protein 0.0
Putative N-terminus
biog3_v1.0_unigene18979 biogeco3 v1.0 201
AutoFact: Replication factor C large subunit (Fragment) n=2 Tax=Poaceae RepID=Q8L6A5_9POAL 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: replication factor c subunit 1-like 0.0
Internal
biog3_v1.0_unigene19389 biogeco3 v1.0 190
AutoFact: CTR1-like protein kinase [Solanum lycopersicum] gb|AAR89823.1| CTR1-like protein kinase [Solanum lycopersicum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ctr1-like protein kinase 0.0
C-terminus
biog3_v1.0_unigene19760 biogeco3 v1.0 319
AutoFact: Pax transcription activation domain interacting protein, putative n=1 Tax=Ricinus communis RepID=B9RSY3_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein Sb09g003520; Sorghum bicolor (Sorghum) (Sorghum vulgare). 0.0
Blast2go: pax transcription activation domain interacting 0.0
Internal
biog3_v1.0_unigene20137 biogeco3 v1.0 399
AutoFact: [K] COG5190 TFIIF-interacting CTD phosphatases, including NLI-interacting factor 2.0e-07
FL-Next: sp=RNA polymerase II C-terminal domain phosphatase-like 3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: rna polymerase ii c-terminal domain phosphatase-like 3-like 0.0
Internal
biog3_v1.0_unigene20283 biogeco3 v1.0 216
AutoFact: WS02827.CR_K08 SS-IB-A-FL-13 Picea sitchensis cDNA clone WS02827_K08 3', mRNA sequence. 0.0
Blast2go: serine threonine-protein kinase ctr1-like 0.0
unknown
biog3_v1.0_unigene20515 biogeco3 v1.0 260
AutoFact: RNA polymerase II C-terminal domain phosphatase-like 4 [Arabidopsis thaliana] sp|Q00IB6.1|CPL4_ARATH RecName: Full=RNA polymerase II C-terminal domain phosphatase-like 4; Short=FCP-like 4; AltName: Full=Carboxyl-terminal phosphatase-like 4; Short=AtCPL4; 0.0
FL-Next: sp=RNA polymerase II C-terminal domain phosphatase-like 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: rna polymerase ii c-terminal domain phosphatase-like 4-like 0.0
Putative C-terminus
biog3_v1.0_unigene20892 biogeco3 v1.0 232
AutoFact: Retrotransposon protein, putative, unclassified n=1 Tax=Oryza sativa Japonica Group RepID=Q2QLK1_ORYSJ 1.0e-35
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: retrotransposon unclassified 2.18061e-35
Putative C-terminus
biog3_v1.0_unigene21554 biogeco3 v1.0 298
AutoFact: putative poly (ADP-ribose) polymerase [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: poly 0.0
Internal
biog3_v1.0_unigene22757 biogeco3 v1.0 251
AutoFact: CTR1-like protein kinase [Solanum lycopersicum] gb|AAR89823.1| CTR1-like protein kinase [Solanum lycopersicum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ctr1-like protein kinase 0.0
Internal
biog3_v1.0_unigene23317 biogeco3 v1.0 267
AutoFact: [RTKL] COG0515 Serine/threonine protein kinase 3.0e-27
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: serine threonine-protein kinase ctr1-like 0.0
Internal
biog3_v1.0_unigene23716 biogeco3 v1.0 241
AutoFact: DNA ligase n=1 Tax=Populus trichocarpa RepID=B9IN68_POPTR 7.0e-26
FL-Next: sp=DNA ligase 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: dna ligase 5.58879e-30
Internal
biog3_v1.0_unigene24561 biogeco3 v1.0 320
AutoFact: Protein kinase [Medicago truncatula] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein kinase 0.0
Internal
biog3_v1.0_unigene24618 biogeco3 v1.0 179
AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Cycas revoluta RepID=Q4JQ46_CYCRE 6.0e-23
Blast2go: reverse transcriptase 3.67401e-30
unknown
biog3_v1.0_unigene24715 biogeco3 v1.0 569
AutoFact: Retrotransposon protein, putative, unclassified n=1 Tax=Oryza sativa Japonica Group RepID=Q2QXM6_ORYSJ 0.0
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Blast2go: retrotransposon unclassified 0.0
Putative C-terminus
biog3_v1.0_unigene24821 biogeco3 v1.0 758
AutoFact: Gag and Pol n=1 Tax=Zea mays RepID=Q8LSK0_MAIZE 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: retrotransposon unclassified 0.0
N-terminus
biog3_v1.0_unigene25164 biogeco3 v1.0 214
AutoFact: Retrotransposon protein, putative, unclassified n=1 Tax=Oryza sativa Japonica Group RepID=Q2QLK1_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: retrotransposon unclassified 0.0
Internal
biog3_v1.0_unigene25994 biogeco3 v1.0 284
AutoFact: WS0336.C21_F15 WS-SE-N-A-18 Picea glauca cDNA clone WS0336_F15 3, mRNA sequence. 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: retrotransposon unclassified 0.0
Internal
biog3_v1.0_unigene25997 biogeco3 v1.0 300
AutoFact: CTR1-like protein kinase [Solanum lycopersicum] gb|AAR89823.1| CTR1-like protein kinase [Solanum lycopersicum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ctr1-like protein kinase 0.0
Internal
biog3_v1.0_unigene26269 biogeco3 v1.0 444
AutoFact: Pentatricopeptide repeat protein (Fragment) n=1 Tax=Picea abies RepID=B3U1V1_PICAB 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat protein 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain