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Assembly Name: biogeco3 v1.0

Name: Thioredoxin, conserved site

Term: IPR017937  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
biog3_v1.0_unigene12186 biogeco3 v1.0 938
• AutoFact: Thioredoxin n=2 Tax=Picea sitchensis RepID=A9NMW7_PICSI 8.0e-23
• FL-Next: sp=Thioredoxin; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: thioredoxin h-type 7.17714e-25
Complete
biog3_v1.0_unigene13511 biogeco3 v1.0 467
• AutoFact: Thioredoxin reductase n=1 Tax=Picea sitchensis RepID=B8LPW6_PICSI 0.0
• Blast2go: nadph-dependent thioredoxin reductase 3-like 0.0
unknown
biog3_v1.0_unigene13891 biogeco3 v1.0 418
• AutoFact: DNA repair protein xp-E, putative n=1 Tax=Ricinus communis RepID=B9SKT9_RICCO 0.0
• FL-Next: sp=DNA damage-binding protein 1b; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: dna damage-binding protein 1a 0.0
Internal
biog3_v1.0_unigene14189 biogeco3 v1.0 418
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 0.0
C-terminus
biog3_v1.0_unigene14690 biogeco3 v1.0 275
• AutoFact: ubiquitin conjugating enzyme-like [Oryza sativa Japonica Group] 0.0
• Blast2go: ubc37 like protein 0.0
Putative coding
biog3_v1.0_unigene14902 biogeco3 v1.0 248
• AutoFact: Thioredoxin Y, chloroplastic n=1 Tax=Oryza sativa Japonica Group RepID=TRXY_ORYSJ 2.0e-40
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: thioredoxin-like protein 0.0
Internal
biog3_v1.0_unigene14991 biogeco3 v1.0 235
• AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9SY02.1|PP301_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g02750 gb|AAD15348.1| hypothetical protein [Arabidopsis thaliana] emb|CAB77760.1| hypothetical protein 5.0e-22
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein at1g11290-like 3.53053e-36
Internal
biog3_v1.0_unigene15079 biogeco3 v1.0 362
• AutoFact: Protein disulfide isomerase like protein n=3 Tax=Glycine max RepID=C4T848_SOYBN 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein disulfide isomerase l-3b 0.0
Internal
biog3_v1.0_unigene15080 biogeco3 v1.0 395
• AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9SN39.1|PP320_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g18750, chloroplastic; Flags: Precursor emb|CAB37460.1| putative protein [Arabidopsis thaliana] emb|CAB 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 0.0
Internal
biog3_v1.0_unigene15087 biogeco3 v1.0 266
• AutoFact: DNA repair protein xp-E, putative n=1 Tax=Ricinus communis RepID=B9SKT9_RICCO 0.0
• FL-Next: sp=DNA damage-binding protein 1; Solanum lycopersicum (Tomato) (Lycopersicon esculentum). 0.0
• Blast2go: dna damage-binding protein 1a 0.0
Internal
biog3_v1.0_unigene15187 biogeco3 v1.0 431
• AutoFact: Tetratricopeptide-like helical n=1 Tax=Medicago truncatula RepID=Q1SN04_MEDTR 1.99965e-42
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 0.0
N-terminus
biog3_v1.0_unigene15192 biogeco3 v1.0 323
• AutoFact: putative pentatricopeptide (PPR) repeat-containing protein [Oryza sativa Japonica Group] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 0.0
Internal
biog3_v1.0_unigene15544 biogeco3 v1.0 360
• AutoFact: putative pentatricopeptide repeat protein [Gossypium hirsutum] 1.0e-36
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat protein 1.97583e-43
Internal
biog3_v1.0_unigene15986 biogeco3 v1.0 170
• AutoFact: Thioredoxin n=2 Tax=Picea sitchensis RepID=A9NMW7_PICSI 0.0
• Blast2go: thioredoxin h 0.0
unknown
biog3_v1.0_unigene16424 biogeco3 v1.0 335
• AutoFact: Glutaredoxin n=2 Tax=rosids RepID=B9GF65_POPTR 3.0e-39
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: grx_c8 - glutaredoxin subgroup iii 0.0
C-terminus
biog3_v1.0_unigene17021 biogeco3 v1.0 204
• AutoFact: Protein disulfide isomerase, putative n=1 Tax=Ricinus communis RepID=B9T6K9_RICCO 0.0
• Blast2go: pdi-like protein 0.0
unknown
biog3_v1.0_unigene17076 biogeco3 v1.0 204
• AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9SY02.1|PP301_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g02750 gb|AAD15348.1| hypothetical protein [Arabidopsis thaliana] emb|CAB77760.1| hypothetical protein 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 0.0
Internal
biog3_v1.0_unigene17251 biogeco3 v1.0 332
• AutoFact: Thioredoxin reductase n=1 Tax=Picea sitchensis RepID=B8LPW6_PICSI 0.0
• FL-Next: sp=Thioredoxin reductase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: nadph-dependent thioredoxin reductase 3-like 0.0
Internal
biog3_v1.0_unigene17848 biogeco3 v1.0 285
• AutoFact: Type 1 4-diphosphocytidyl-2C-methyl-D-erythritol kinase n=1 Tax=Ginkgo biloba RepID=A6XAA8_GINBI 0.0
• FL-Next: sp=4-diphosphocytidyl-2-C-methyl-D-erythritol kinase, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: 4-diphosphocytidyl-2-c-methyl-d-erythritol kinase 0.0
Internal
biog3_v1.0_unigene18470 biogeco3 v1.0 213
• AutoFact: PREDICTED: similar to Tetratricopeptide-like helical n=1 Tax=Vitis vinifera RepID=UPI0001984A05 2.0e-27
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein chloroplastic-like 1.52049e-38
Putative N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain