|
Sequence
|
Assembly
|
Length (nt)
|
|
Full-Length
|
|
biog3_v1.0_unigene26
|
biogeco3 v1.0
|
676
|
|
• AutoFact: 30S ribosomal protein S1, chloroplastic n=1 Tax=Spinacia oleracea RepID=RR1_SPIOL
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: ribosomal protein s1
|
0.0
|
|
C-terminus
|
|
biog3_v1.0_unigene89
|
biogeco3 v1.0
|
433
|
|
• AutoFact: methionyl-tRNA synthetase (ISS) [Ostreococcus tauri] emb|CAL49998.1| methionyl-tRNA synthetase (ISS) [Ostreococcus tauri]
|
1.0e-21
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: methionyl-trna synthetase
|
0.0
|
|
N-terminus
|
|
biog3_v1.0_unigene201
|
biogeco3 v1.0
|
519
|
|
• AutoFact: replication licensing factor MCM7 homologue [Zea mays] emb|CAC44902.1| replication licensing factor MCM7 homologue [Zea mays]
|
0.0
|
|
• FL-Next: sp=Protein PROLIFERA; Arabidopsis thaliana (Mouse-ear cress).
|
0.0
|
|
• Blast2go: protein prolifera
|
0.0
|
|
N-terminus
|
|
biog3_v1.0_unigene260
|
biogeco3 v1.0
|
402
|
|
• AutoFact: [L] COG1241 Predicted ATPase involved in replication control, Cdc46/Mcm family
|
1.0e-37
|
|
• FL-Next: tr=Os02g0797400 protein; Oryza sativa subsp. japonica (Rice).
|
0.0
|
|
• Blast2go: at2g07360-like protein
|
0.0
|
|
Putative N-terminus
|
|
biog3_v1.0_unigene414
|
biogeco3 v1.0
|
871
|
|
• AutoFact: 40S ribosomal protein S11-1 n=11 Tax=core eudicotyledons RepID=RS111_ARATH
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: 40s ribosomal protein s11
|
0.0
|
|
Complete
|
|
biog3_v1.0_unigene438
|
biogeco3 v1.0
|
2672
|
|
• AutoFact: aspartyl-tRNA synthetase [Arabidopsis thaliana] ref|NP_194847.3| aspartyl-tRNA synthetase [Arabidopsis thaliana] emb|CAB79836.1| aspartate--tRNA ligase-like protein [Arabidopsis thaliana] dbj|BAH20270.1| AT4G31180 [Arabidopsis thaliana] gb|AEE85872.1| asp
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: aspartyl-trna synthetase
|
0.0
|
|
Complete
|
|
biog3_v1.0_unigene459
|
biogeco3 v1.0
|
1509
|
|
• AutoFact: Eukaryotic translation initiation factor 2 subunit 1 [Arabidopsis thaliana] gb|AAL86344.1| putative eukaryotic translation initiation factor 2 alpha subunit eIF2 [Arabidopsis thaliana] gb|AAD25664.2| putative eukaryotic translation initiation factor 2 alp
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: eukaryotic translation initiation factor 2 subunit alpha
|
0.0
|
|
Complete
|
|
biog3_v1.0_unigene953
|
biogeco3 v1.0
|
417
|
|
• AutoFact: methionyl-tRNA synthetase (ISS) [Ostreococcus tauri] emb|CAL49998.1| methionyl-tRNA synthetase (ISS) [Ostreococcus tauri]
|
1.0e-21
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: methionyl-trna synthetase
|
0.0
|
|
C-terminus
|
|
biog3_v1.0_unigene1244
|
biogeco3 v1.0
|
572
|
|
• AutoFact: RPA 70kDa subunit [Pisum sativum]
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: replication factor a1
|
0.0
|
|
Putative Complete
|
|
biog3_v1.0_unigene1326
|
biogeco3 v1.0
|
281
|
|
• AutoFact: small subunit ribosomal protein S1 [Arabidopsis thaliana] gb|AAF43225.1|AC012654_9 Contains S1 RNA binding domain PF|00575. EST gb|AI997850 comes from this gene [Arabidopsis thaliana] gb|AEE35223.1| small subunit ribosomal protein S1 [Arabidopsis thaliana
|
5.04467e-44
|
|
• Blast2go: protein
|
0.0
|
|
Coding
|
|
biog3_v1.0_unigene1588
|
biogeco3 v1.0
|
844
|
|
• AutoFact: mRNA capping enzyme-like protein [Arabidopsis thaliana] gb|AEE74723.1| mRNA capping enzyme-like protein [Arabidopsis thaliana]
|
0.0
|
|
• FL-Next: tr=Predicted protein; subsp. trichocarpa).
|
0.0
|
|
• Blast2go: mrna-capping enzyme-like
|
0.0
|
|
C-terminus
|
|
biog3_v1.0_unigene1956
|
biogeco3 v1.0
|
467
|
|
• AutoFact: S1 RNA-binding domain-containing protein [Arabidopsis thaliana] gb|AAK76665.1| putative heat shock factor protein hsf8 [Arabidopsis thaliana] gb|AAN71967.1| putative heat shock factor protein hsf8 [Arabidopsis thaliana] dbj|BAH30290.1| hypothetical protei
|
0.0
|
|
• FL-Next: tr=Heat shock factor protein hsf8-like; Oryza sativa subsp. japonica (Rice).
|
0.0
|
|
• Blast2go: s1 rna-binding domain-containing protein
|
0.0
|
|
Internal
|
|
biog3_v1.0_unigene1988
|
biogeco3 v1.0
|
323
|
|
• AutoFact: Nucleic acid-binding, OB-fold-like protein [Arabidopsis thaliana] gb|AAS76692.1| At4g18590 [Arabidopsis thaliana] gb|AAS88756.1| At4g18590 [Arabidopsis thaliana] gb|AEE84064.1| Nucleic acid-binding, OB-fold-like protein [Arabidopsis thaliana]
|
3.0e-26
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: pollen-specific protein like
|
0.0
|
|
N-terminus
|
|
biog3_v1.0_unigene2002
|
biogeco3 v1.0
|
783
|
|
• AutoFact: methionyl-tRNA synthetase [Oryza sativa]
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: methionyl-trna synthetase
|
0.0
|
|
Putative C-terminus
|
|
biog3_v1.0_unigene2007
|
biogeco3 v1.0
|
302
|
|
• AutoFact: Polyribonucleotide phophorylase (Fragment) n=1 Tax=Spinacia oleracea RepID=Q41370_SPIOL
|
2.0e-30
|
|
• FL-Next: tr=Putative uncharacterized protein Sb02g003900; Sorghum bicolor (Sorghum) (Sorghum vulgare).
|
0.0
|
|
• Blast2go: polyribonucleotide nucleotidyltransferase
|
9.65427e-38
|
|
Internal
|
|
biog3_v1.0_unigene2082
|
biogeco3 v1.0
|
795
|
|
• AutoFact: 30S ribosomal protein S17, putative n=1 Tax=Ricinus communis RepID=B9RQK5_RICCO
|
9.0e-23
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: 30s ribosomal protein s17
|
0.0
|
|
Complete
|
|
biog3_v1.0_unigene2302
|
biogeco3 v1.0
|
321
|
|
• AutoFact: DNA ligase (Fragment) n=2 Tax=Vitis vinifera RepID=D7SQI2_VITVI
|
0.0
|
|
• FL-Next: sp=Putative DNA ligase 4; Oryza sativa subsp. japonica (Rice).
|
0.0
|
|
• Blast2go: dna ligase
|
0.0
|
|
Internal
|
|
biog3_v1.0_unigene2579
|
biogeco3 v1.0
|
381
|
|
• AutoFact: chloroplast polyprotein of elongation factor Ts precursor [Arabidopsis thaliana]
|
0.0
|
|
• Blast2go: protein
|
0.0
|
|
Coding
|
|
biog3_v1.0_unigene2581
|
biogeco3 v1.0
|
834
|
|
• AutoFact: DUF707 domain containing protein
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: uncharacterized protein
|
0.0
|
|
Putative C-terminus
|
|
biog3_v1.0_unigene2643
|
biogeco3 v1.0
|
609
|
|
• AutoFact: Eukaryotic translation initiation factor 5A 4 n=1 Tax=Picea abies RepID=Q3ZDK5_PICAB
|
0.0
|
|
• FL-Next: tr=Eukaryotic translation initiation factor 5A 4; Picea abies (Norway spruce) (Picea excelsa).
|
0.0
|
|
• Blast2go: eukaryotic translation initiation factor 5a isoform iv
|
0.0
|
|
C-terminus
|
