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Assembly Name: biogeco3 v1.0

Name: WD40-repeat-containing domain

Term: IPR017986  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog3_v1.0_unigene26340 biogeco3 v1.0 182
AutoFact: [R] COG2319 FOG: WD40 repeat 4.0e-07
FL-Next: sp=Protein TOPLESS; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: wd repeat-containing 0.0
Internal
biog3_v1.0_unigene26354 biogeco3 v1.0 263
AutoFact: putative pentatricopeptide (PPR) repeat-containing protein [Oryza sativa Japonica Group] gb|EEC72563.1| hypothetical protein OsI_05996 [Oryza sativa Indica Group] 2.0e-25
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat-containing protein 5.86439e-31
Internal
biog3_v1.0_unigene26357 biogeco3 v1.0 197
AutoFact: WD-repeat protein, putative n=1 Tax=Ricinus communis RepID=B9T1Y8_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Glycine max (Soybean) (Glycine hispida). 0.0
Blast2go: ddb1- and cul4-associated factor 8-like 0.0
Internal
biog3_v1.0_unigene26381 biogeco3 v1.0 234
AutoFact: transducin/WD-40 repeat-containing protein [Arabidopsis thaliana] ref|NP_850516.1| transducin/WD-40 repeat-containing protein [Arabidopsis thaliana] gb|AAL07141.1| unknown protein [Arabidopsis thaliana] gb|AAM83246.1| AT3g05090/T12H1_5 [Arabidopsis thalia 0.0
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: wd repeat-containing protein 48-like 0.0
Internal
biog3_v1.0_unigene26392 biogeco3 v1.0 282
AutoFact: [R] COG2319 FOG: WD40 repeat 2.0e-10
Blast2go: protein 0.0
unknown
biog3_v1.0_unigene26409 biogeco3 v1.0 296
AutoFact: transducin/WD40 domain-containing protein [Arabidopsis thaliana] emb|CAB51411.1| putative protein [Arabidopsis thaliana] emb|CAB81228.1| putative protein [Arabidopsis thaliana] gb|AEE82991.1| transducin/WD40 domain-containing protein [Arabidopsis thaliana 3.00004e-41
FL-Next: tr=Os06g0331300 protein; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: transducin family protein 0.0
Internal
biog3_v1.0_unigene26632 biogeco3 v1.0 450
AutoFact: cinnamoyl-CoA reductase-like protein [Arabidopsis thaliana] 3.0e-21
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: cinnamoyl- reductase-like protein 2.158e-43
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain