Sustainpine_db
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Assembly Name: biogeco3 v1.0

Name: WD40/YVTN repeat-like-containing domain

Term: IPR015943  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog3_v1.0_unigene6184 biogeco3 v1.0 1111
AutoFact: WD-repeat protein, putative n=1 Tax=Ricinus communis RepID=B9SRX4_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
N-terminus
biog3_v1.0_unigene6242 biogeco3 v1.0 1578
AutoFact: Fertilization-independent endosperm (Fragment) n=2 Tax=Hieracium RepID=B1ABR5_HIEPL 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: fertilization-independent endosperm protein 0.0
Complete
biog3_v1.0_unigene6244 biogeco3 v1.0 1092
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ramosa 1 enhancer locus 2 0.0
Putative Complete
biog3_v1.0_unigene6284 biogeco3 v1.0 471
AutoFact: transducin family protein / WD-40 repeat family protein [Arabidopsis thaliana] gb|AAC63653.1| unknown protein [Arabidopsis thaliana] gb|AAM15129.1| unknown protein [Arabidopsis thaliana] gb|AEC10921.1| transducin family protein / WD-40 repeat family prote 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: u3 small nucleolar rna-associated protein 0.0
Internal
biog3_v1.0_unigene6356 biogeco3 v1.0 1294
AutoFact: WD-40 repeat-containing protein MSI1 n=8 Tax=core eudicotyledons RepID=MSI1_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: multicopy suppressor of ira1 0.0
Complete
biog3_v1.0_unigene6379 biogeco3 v1.0 718
AutoFact: coatomer complex subunit [Brachypodium sylvaticum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: coatomer subunit beta -3 0.0
Putative C-terminus
biog3_v1.0_unigene6407 biogeco3 v1.0 1222
AutoFact: transducin/WD-40 repeat-containing protein [Arabidopsis thaliana] gb|AAK50091.1|AF372951_1 At1g78070/F28K19_28 [Arabidopsis thaliana] gb|AAN72242.1| At1g78070/F28K19_28 [Arabidopsis thaliana] gb|AEE36064.1| transducin/WD-40 repeat-containing protein [Arab 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
biog3_v1.0_unigene6481 biogeco3 v1.0 395
AutoFact: transducin/WD-40 repeat-containing protein [Arabidopsis thaliana] ref|NP_175682.2| transducin/WD-40 repeat-containing protein [Arabidopsis thaliana] gb|AAD55591.1|AC008016_1 Similar to gb|AJ010025 unr-interacting protein from Homo sapiens and contains 3 P 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: serine-threonine kinase receptor-associated 0.0
N-terminus
biog3_v1.0_unigene6549 biogeco3 v1.0 1550
AutoFact: cellulose synthase 6 [Eucalyptus grandis] 0.0
FL-Next: tr=Cellulose synthase; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
Blast2go: family 2 glycosyltransferase 0.0
Internal
biog3_v1.0_unigene6565 biogeco3 v1.0 575
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Zea mays (Maize). 0.0
Blast2go: uncharacterized protein 0.0
C-terminus
biog3_v1.0_unigene6586 biogeco3 v1.0 476
AutoFact: transducin/WD-40 repeat-containing protein [Arabidopsis thaliana] gb|AAK50091.1|AF372951_1 At1g78070/F28K19_28 [Arabidopsis thaliana] gb|AAN72242.1| At1g78070/F28K19_28 [Arabidopsis thaliana] gb|AEE36064.1| transducin/WD-40 repeat-containing protein [Arab 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
N-terminus
biog3_v1.0_unigene6687 biogeco3 v1.0 352
AutoFact: transducin/WD40 domain-containing protein [Arabidopsis thaliana] gb|AAK92820.1| unknown protein [Arabidopsis thaliana] gb|AAL08286.1| AT4g18900/F13C5_70 [Arabidopsis thaliana] gb|AAM44990.1| unknown protein [Arabidopsis thaliana] gb|AEE84104.1| transducin 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: transducin wd40 domain-containing protein 0.0
N-terminus
biog3_v1.0_unigene6760 biogeco3 v1.0 755
AutoFact: regulatory associated protein of mTOR [Arabidopsis thaliana] sp|Q93YQ1.1|RTOR1_ARATH RecName: Full=Regulatory-associated protein of TOR 1; AltName: Full=Protein RAPTOR 1; AltName: Full=Protein RAPTOR 1B; Short=AtRaptor1b gb|AAL24320.1| Unknown protein [Ar 0.0
FL-Next: sp=Regulatory-associated protein of TOR 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: regulatory-associated protein of tor 1-like 0.0
Internal
biog3_v1.0_unigene6842 biogeco3 v1.0 316
AutoFact: Zinc finger CCCH domain-containing protein 17 n=4 Tax=Oryza sativa RepID=C3H17_ORYSJ 0.0
Blast2go: zinc finger ccch domain-containing protein 48 0.0
unknown
biog3_v1.0_unigene6845 biogeco3 v1.0 2399
AutoFact: phospholipase A-2-activating protein [Arabidopsis thaliana] gb|AAK95297.1|AF410311_1 AT3g18860/MCB22_3 [Arabidopsis thaliana] dbj|BAB03095.1| unnamed protein product [Arabidopsis thaliana] gb|AEE76160.1| phospholipase A-2-activating protein [Arabidopsis t 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: phospholipase a-2-activating protein 0.0
Putative Complete
biog3_v1.0_unigene6899 biogeco3 v1.0 737
AutoFact: Ser/Thr specific protein phosphatase 2A B regulatory subunit beta isoform n=3 Tax=rosids RepID=Q9FVD4_MEDSV 0.0
FL-Next: Isoform 2 of Serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform OS=Arabidopsis thaliana GN=PP2AB1 0.0
Blast2go: protein 0.0
Internal
biog3_v1.0_unigene6996 biogeco3 v1.0 589
AutoFact: Unassigned protein
FL-Next: tr=Nucleotide binding protein, putative; Ricinus communis (Castor bean). 0.0
Blast2go: enhancer of mrna-decapping protein 4-like 0.0
Internal
biog3_v1.0_unigene7029 biogeco3 v1.0 612
AutoFact: Unassigned protein
FL-Next: sp=Protein TOPLESS; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
biog3_v1.0_unigene7102 biogeco3 v1.0 323
AutoFact: Unassigned protein
unknown
biog3_v1.0_unigene7117 biogeco3 v1.0 723
AutoFact: cellulose synthase 6 [Populus tremuloides] 0.0
FL-Next: tr=Cellulose synthase; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
Blast2go: cellulose synthase 0.0
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain