Sustainpine_db
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Assembly Name: biogeco3 v1.0

Name: WD40/YVTN repeat-like-containing domain

Term: IPR015943  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog3_v1.0_unigene2814 biogeco3 v1.0 714
AutoFact: p450 domain containing protein 6.0e-06
FL-Next: tr=Putative uncharacterized protein; Zea mays (Maize). 0.0
Blast2go: vascular protein 0.0
C-terminus
biog3_v1.0_unigene2882 biogeco3 v1.0 920
AutoFact: [R] COG2319 FOG: WD40 repeat 4.0e-07
FL-Next: sp=Protein TOPLESS; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: wd repeat-containing 0.0
C-terminus
biog3_v1.0_unigene2883 biogeco3 v1.0 327
AutoFact: [R] COG2319 FOG: WD40 repeat 4.0e-18
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein spa1-related 3-like 0.0
Internal
biog3_v1.0_unigene2913 biogeco3 v1.0 405
AutoFact: O-fucosyltransferase family protein [Arabidopsis thaliana] gb|AAQ89634.1| At1g14020 [Arabidopsis thaliana] dbj|BAF01665.1| growth regulator like protein [Arabidopsis thaliana] dbj|BAF01818.1| growth regulator like protein [Arabidopsis thaliana] gb|AEE2909 1.0e-14
FL-Next: tr=Putative uncharacterized protein; Ricinus communis (Castor bean). 0.0
Blast2go: protein 1.35613e-15
Putative C-terminus
biog3_v1.0_unigene3087 biogeco3 v1.0 1076
AutoFact: cellulose synthase 6 [Populus tremuloides] 0.0
FL-Next: tr=Cellulose synthase; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
Blast2go: cellulose synthase 0.0
Internal
biog3_v1.0_unigene3093 biogeco3 v1.0 278
AutoFact: Serine/threonine-protein phosphatase (Fragment) n=2 Tax=Vitis vinifera RepID=D7TP64_VITVI 0.0
FL-Next: sp=Serine/threonine-protein phosphatase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: serine threonine protein phosphatase 0.0
Putative N-terminus
biog3_v1.0_unigene3148 biogeco3 v1.0 284
AutoFact: WD repeat and SOF domain-containing protein 1 [Arabidopsis thaliana] gb|AAK50083.1|AF372943_1 AT4g28450/F20O9_130 [Arabidopsis thaliana] gb|AAK73982.1| AT4g28450/F20O9_130 [Arabidopsis thaliana] gb|AAN28840.1| At4g28450/F20O9_130 [Arabidopsis thaliana] gb 0.0
FL-Next: tr=Putative uncharacterized protein Sb03g000410; Sorghum bicolor (Sorghum) (Sorghum vulgare). 0.0
Blast2go: ddb1- and cul4-associated factor 0.0
Internal
biog3_v1.0_unigene3314 biogeco3 v1.0 340
AutoFact: Protein translocase subunit secA (Fragment) n=2 Tax=Vitis vinifera RepID=E0CR18_VITVI 0.0
FL-Next: sp=Protein translocase subunit SecA; Phaeodactylum tricornutum (strain CCAP 1055/1). Plastid; Chloroplast. 0.0
Blast2go: preprotein translocase seca-like protein 0.0
Putative C-terminus
biog3_v1.0_unigene3350 biogeco3 v1.0 450
AutoFact: Nucleotide binding protein, putative n=1 Tax=Ricinus communis RepID=B9SED3_RICCO 0.0
FL-Next: sp=Tryptophan aminotransferase-related protein 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: tryptophan aminotransferase-related protein 4-like 0.0
Internal
biog3_v1.0_unigene3353 biogeco3 v1.0 459
AutoFact: transducin family protein / WD-40 repeat family protein [Arabidopsis thaliana] gb|AAC63653.1| unknown protein [Arabidopsis thaliana] gb|AAM15129.1| unknown protein [Arabidopsis thaliana] gb|AEC10921.1| transducin family protein / WD-40 repeat family prote 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: u3 small nucleolar rna-associated protein 0.0
Putative N-terminus
biog3_v1.0_unigene3443 biogeco3 v1.0 587
AutoFact: transducin/WD40 domain-containing protein [Arabidopsis thaliana] gb|AEE79079.1| transducin/WD40 domain-containing protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: transducin wd-40 repeat-containing protein 0.0
C-terminus
biog3_v1.0_unigene3450 biogeco3 v1.0 294
AutoFact: p450 domain containing protein 6.0e-06
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: vascular protein 0.0
Putative N-terminus
biog3_v1.0_unigene3482 biogeco3 v1.0 788
AutoFact: WD-repeat protein, putative n=1 Tax=Ricinus communis RepID=B9SAP3_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Putative C-terminus
biog3_v1.0_unigene3541 biogeco3 v1.0 592
AutoFact: Nucleotide binding protein, putative n=1 Tax=Ricinus communis RepID=B9RDD1_RICCO 0.0
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: protein 0.0
Internal
biog3_v1.0_unigene3568 biogeco3 v1.0 485
AutoFact: WS0348.C21_I08 WS-SE-N-A-19 Picea glauca cDNA clone WS0348_I08 3, mRNA sequence. 0.0
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: enhancer of mrna-decapping protein 4-like 0.0
Putative C-terminus
biog3_v1.0_unigene3676 biogeco3 v1.0 1640
AutoFact: WD-repeat protein, putative n=1 Tax=Ricinus communis RepID=B9S4H8_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: atg18c-like protein 0.0
Putative Complete
biog3_v1.0_unigene3754 biogeco3 v1.0 362
AutoFact: Serine/threonine-protein phosphatase (Fragment) n=5 Tax=Magnoliophyta RepID=D7T1Q5_VITVI 0.0
FL-Next: sp=Serine/threonine-protein phosphatase BSL3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: serine threonine-protein phosphatase bsl2-like 0.0
Internal
biog3_v1.0_unigene3784 biogeco3 v1.0 757
AutoFact: Unassigned protein
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: enhancer of mrna-decapping protein 4-like 0.0
C-terminus
biog3_v1.0_unigene3786 biogeco3 v1.0 1188
AutoFact: transducin/WD40 domain-containing protein [Arabidopsis thaliana] dbj|BAB02018.1| WD40-repeat protein [Arabidopsis thaliana] gb|AAL32514.1| WD40-repeat protein [Arabidopsis thaliana] gb|AAM47943.1| WD40-repeat protein [Arabidopsis thaliana] gb|AEE76041.1| 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 66 kda stress protein 0.0
Putative C-terminus
biog3_v1.0_unigene3796 biogeco3 v1.0 1262
AutoFact: enhancer of mRNA-decapping protein 4 [Arabidopsis thaliana] gb|AEE75331.1| enhancer of mRNA-decapping protein 4 [Arabidopsis thaliana] 0.0
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: enhancer of mrna-decapping protein 4 0.0
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain