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Assembly Name: biogeco3 v1.0

Name: Armadillo-like helical

Term: IPR011989  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog3_v1.0_unigene15815 biogeco3 v1.0 285
AutoFact: Unassigned protein
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: low quality protein: heat repeat-containing protein 7a homolog 0.0
Internal
biog3_v1.0_unigene15835 biogeco3 v1.0 313
AutoFact: Kinesin heavy chain, putative n=1 Tax=Ricinus communis RepID=B9RBV4_RICCO 0.0
FL-Next: sp=Armadillo repeat-containing kinesin-like protein 3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: armadillo repeat-containing kinesin-like protein 3 0.0
Internal
biog3_v1.0_unigene15898 biogeco3 v1.0 299
AutoFact: Armadillo/beta-catenin-like repeats-containing protein n=2 Tax=Arabidopsis RepID=Q8S8G1_ARATH 1.99965e-42
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: protein 0.0
Internal
biog3_v1.0_unigene15966 biogeco3 v1.0 368
AutoFact: Sil1, putative n=1 Tax=Ricinus communis RepID=B9RG44_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: nucleotide exchange factor sil1 0.0
Internal
biog3_v1.0_unigene16123 biogeco3 v1.0 302
AutoFact: Kinesin heavy chain, putative n=1 Tax=Ricinus communis RepID=B9RBV4_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: armadillo repeat-containing kinesin-like protein 3 0.0
Internal
biog3_v1.0_unigene16135 biogeco3 v1.0 292
AutoFact: WS02841.CR_A04 SS-IB-A-FL-13 Picea sitchensis cDNA clone WS02841_A04 3', mRNA sequence. 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: low quality protein: probable inactive serine threonine-protein kinase scy1-like 0.0
Internal
biog3_v1.0_unigene16155 biogeco3 v1.0 159
AutoFact: armadillo/beta-catenin-like repeats-containing protein [Arabidopsis thaliana] gb|AAM13139.1| unknown protein [Arabidopsis thaliana] gb|AAP37775.1| At1g51350 [Arabidopsis thaliana] gb|AEE32654.1| armadillo/beta-catenin-like repeats-containing protein [Arab 0.0
Blast2go: armadillo repeat-containing protein 8-like 0.0
unknown
biog3_v1.0_unigene16159 biogeco3 v1.0 262
AutoFact: histone deacetylase 14 [Arabidopsis thaliana] sp|Q941D6.1|HDA14_ARATH RecName: Full=Histone deacetylase 14 gb|AAK97704.1| AT4g33470/F17M5_230 [Arabidopsis thaliana] gb|AAM47377.1| AT4g33470/F17M5_230 [Arabidopsis thaliana] gb|AEE86231.1| histone deacetyla 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone deacetylase 0.0
Internal
biog3_v1.0_unigene16277 biogeco3 v1.0 224
AutoFact: Unassigned protein
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: protein 0.0
Internal
biog3_v1.0_unigene16317 biogeco3 v1.0 163
AutoFact: ATP binding protein, putative n=1 Tax=Ricinus communis RepID=B9RSY9_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: serine threonine-protein kinase ulk4-like 0.0
Putative C-terminus
biog3_v1.0_unigene16356 biogeco3 v1.0 321
AutoFact: ubiquitin-protein ligase 1 [Arabidopsis thaliana] 0.0
FL-Next: sp=E3 ubiquitin-protein ligase UPL2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: e3 ubiquitin-protein ligase upl1-like 0.0
Internal
biog3_v1.0_unigene16435 biogeco3 v1.0 273
AutoFact: armadillo/beta-catenin-like repeats-containing protein [Arabidopsis thaliana] gb|AAM13139.1| unknown protein [Arabidopsis thaliana] gb|AAP37775.1| At1g51350 [Arabidopsis thaliana] gb|AEE32654.1| armadillo/beta-catenin-like repeats-containing protein [Arab 0.0
Blast2go: armadillo repeat-containing protein 8-like 0.0
unknown
biog3_v1.0_unigene16449 biogeco3 v1.0 284
AutoFact: regulatory associated protein of mTOR [Arabidopsis thaliana] sp|Q93YQ1.1|RTOR1_ARATH RecName: Full=Regulatory-associated protein of TOR 1; AltName: Full=Protein RAPTOR 1; AltName: Full=Protein RAPTOR 1B; Short=AtRaptor1b gb|AAL24320.1| Unknown protein [Ar 0.0
FL-Next: sp=Regulatory-associated protein of TOR 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: regulatory-associated protein of tor 1-like 0.0
C-terminus
biog3_v1.0_unigene16464 biogeco3 v1.0 287
AutoFact: Unassigned protein
Blast2go: u-box domain-containing protein 15-like 3.79008e-27
Putative coding
biog3_v1.0_unigene16506 biogeco3 v1.0 269
AutoFact: Mitogen activated protein kinase kinase kinase 3, mapkkk3, mekk3, putative n=1 Tax=Ricinus communis RepID=B9RTY0_RICCO 0.0
Blast2go: mitogen activated protein kinase kinase kinase 0.0
Coding
biog3_v1.0_unigene16519 biogeco3 v1.0 208
AutoFact: DUF632 domain containing protein 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Internal
biog3_v1.0_unigene16538 biogeco3 v1.0 176
AutoFact: armadillo repeat-containing protein [Arabidopsis thaliana] emb|CAA18497.1| putative protein [Arabidopsis thaliana] emb|CAB81512.1| putative protein [Arabidopsis thaliana] dbj|BAC42097.1| unknown protein [Arabidopsis thaliana] gb|AAO50454.1| unknown protei 0.0
Blast2go: protein 0.0
unknown
biog3_v1.0_unigene16551 biogeco3 v1.0 375
AutoFact: Armadillo/beta-catenin repeat protein-like n=2 Tax=Oryza sativa RepID=Q6Z6H7_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Medicago truncatula (Barrel medic) (Medicago tribuloides). 0.0
Blast2go: protein 0.0
Putative C-terminus
biog3_v1.0_unigene16582 biogeco3 v1.0 263
AutoFact: putative mitogen-activated protein kinase 1 [Medicago sativa] 0.0
Blast2go: mitogen-activated protein kinase kinase kinase 0.0
unknown
biog3_v1.0_unigene16594 biogeco3 v1.0 304
AutoFact: Unassigned protein
FL-Next: Isoform 2 of Pumilio homolog 23 OS=Arabidopsis thaliana GN=APUM23 0.0
Blast2go: pumilio 23 2.68199e-27
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain