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Assembly Name: biogeco3 v1.0

Name: Armadillo-like helical

Term: IPR011989  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog3_v1.0_unigene10269 biogeco3 v1.0 520
AutoFact: TGA-type basic leucine zipper protein TGA2.2 [Phaseolus vulgaris] 0.0
Blast2go: tga transcription factor 0.0
unknown
biog3_v1.0_unigene10340 biogeco3 v1.0 573
AutoFact: pfam11916, Vac14_Fig4_bd, Vacuolar protein 14 C-terminal Fig4p binding 0.0
FL-Next: tr=Putative uncharacterized protein; Ricinus communis (Castor bean). 0.0
Blast2go: protein vac14 homolog 0.0
N-terminus
biog3_v1.0_unigene10387 biogeco3 v1.0 315
AutoFact: AP-1 complex subunit gamma-2, putative n=1 Tax=Ricinus communis RepID=B9S4M0_RICCO 0.0
FL-Next: sp=AP-1 complex subunit gamma-2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: ap-1 complex subunit gamma-2 0.0
Internal
biog3_v1.0_unigene10390 biogeco3 v1.0 1330
AutoFact: TGA-type basic leucine zipper protein TGA2.2 [Phaseolus vulgaris] 0.0
FL-Next: sp=Transcription factor HBP-1b(c38); Triticum aestivum (Wheat). 0.0
Blast2go: tga transcription factor 0.0
N-terminus
biog3_v1.0_unigene10446 biogeco3 v1.0 1155
AutoFact: Guanine nucleotide-exchange factor n=3 Tax=Arabidopsis RepID=F4IXW2_ARATH 0.0
FL-Next: sp=Pattern formation protein EMB30; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 0.0
Internal
biog3_v1.0_unigene10472 biogeco3 v1.0 295
AutoFact: putative ubiquitin-protein ligase 1 [Oryza sativa Japonica Group] 0.0
FL-Next: sp=E3 ubiquitin-protein ligase UPL2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: ubiquitin-protein ligase 1 0.0
Internal
biog3_v1.0_unigene10516 biogeco3 v1.0 219
AutoFact: pfam02296, Alpha_adaptin_C, Alpha adaptin AP2, C-terminal domain 8.0e-16
FL-Next: sp=AP-2 complex subunit alpha-2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: ap-2 complex subunit alpha-1 0.0
Internal
biog3_v1.0_unigene10568 biogeco3 v1.0 535
AutoFact: 4-methyl-5(b-hydroxyethyl)-thiazole monophosphate biosynthesis [Arabidopsis thaliana] gb|AAF69547.1|AC008007_22 F12M16.18 [Arabidopsis thaliana] gb|AAL07117.1| unknown protein [Arabidopsis thaliana] gb|AAM14123.1| unknown protein [Arabidopsis thaliana] gb 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 4-methyl-5(b-hydroxyethyl)-thiazol monophosphate biosynthesis enzyme 0.0
Putative C-terminus
biog3_v1.0_unigene10650 biogeco3 v1.0 943
AutoFact: AP-1 complex subunit gamma-2, putative n=1 Tax=Ricinus communis RepID=B9S4M0_RICCO 0.0
FL-Next: sp=AP-1 complex subunit gamma-1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: ap-1 complex subunit gamma-2 0.0
C-terminus
biog3_v1.0_unigene10659 biogeco3 v1.0 535
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Internal
biog3_v1.0_unigene10744 biogeco3 v1.0 345
AutoFact: Progesterone 5beta reductase-A n=4 Tax=Solanaceae RepID=C0SUC5_TOBAC 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: progesterone 5-beta-reductase 0.0
C-terminus
biog3_v1.0_unigene10775 biogeco3 v1.0 691
AutoFact: phosphorylase family protein [Arabidopsis thaliana] dbj|BAC43650.1| unknown protein [Arabidopsis thaliana] gb|AAO63378.1| At4g24340 [Arabidopsis thaliana] gb|AEE84891.1| phosphorylase family protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: phosphorylase family protein 0.0
C-terminus
biog3_v1.0_unigene10893 biogeco3 v1.0 578
AutoFact: WS02841.CR_A04 SS-IB-A-FL-13 Picea sitchensis cDNA clone WS02841_A04 3', mRNA sequence. 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: low quality protein: probable inactive serine threonine-protein kinase scy1-like 0.0
C-terminus
biog3_v1.0_unigene10929 biogeco3 v1.0 647
AutoFact: histone deacetylase 14 [Arabidopsis thaliana] sp|Q941D6.1|HDA14_ARATH RecName: Full=Histone deacetylase 14 gb|AAK97704.1| AT4g33470/F17M5_230 [Arabidopsis thaliana] gb|AAM47377.1| AT4g33470/F17M5_230 [Arabidopsis thaliana] gb|AEE86231.1| histone deacetyla 0.0
FL-Next: sp=Histone deacetylase 14; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: histone deacetylase 0.0
N-terminus
biog3_v1.0_unigene10999 biogeco3 v1.0 416
AutoFact: TGA-type basic leucine zipper protein TGA2.1 [Phaseolus vulgaris] 0.0
FL-Next: sp=Transcription factor TGA3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: transcription factor hbp-1b 0.0
C-terminus
biog3_v1.0_unigene11011 biogeco3 v1.0 673
AutoFact: Apyrase-like protein n=1 Tax=Nicotiana tabacum RepID=A0MWC2_TOBAC 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: apyrase-like protein 0.0
N-terminus
biog3_v1.0_unigene11064 biogeco3 v1.0 886
AutoFact: nuclear protein localization protein 4-like protein [Arabidopsis thaliana] sp|Q9LYC2.1|NPL41_ARATH RecName: Full=NPL4-like protein 1 emb|CAB87745.1| putative protein [Arabidopsis thaliana] gb|AAK59569.1| unknown protein [Arabidopsis thaliana] gb|AAL07248. 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: npl4-like protein 2 0.0
Internal
biog3_v1.0_unigene11100 biogeco3 v1.0 758
AutoFact: AP-4 complex subunit epsilon [Arabidopsis thaliana] sp|Q8L7A9.1|AP4E_ARATH RecName: Full=AP-4 complex subunit epsilon; AltName: Full=AP-4 adapter complex subunit epsilon; AltName: Full=Adapter-related protein complex 4 subunit epsilon; AltName: Full=Epsil 0.0
FL-Next: tr=Putative uncharacterized protein Sb03g043730; Sorghum bicolor (Sorghum) (Sorghum vulgare). 0.0
Blast2go: ap-4 complex subunit epsilon-like 0.0
Internal
biog3_v1.0_unigene11183 biogeco3 v1.0 1002
AutoFact: CLIP-associated protein [Arabidopsis thaliana] gb|AAM13846.1| unknown protein [Arabidopsis thaliana] gb|AEC06980.1| CLIP-associated protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
biog3_v1.0_unigene11216 biogeco3 v1.0 1032
AutoFact: Predicted protein n=3 Tax=Physcomitrella patens subsp. patens RepID=A9SMX6_PHYPA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain