Sustainpine_db
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Assembly Name: biogeco3 v1.0

Name: Chlorophyll A-B binding protein, plant

Term: IPR001344  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
biog3_v1.0_unigene56 biogeco3 v1.0 1000
• AutoFact: Lhca4 protein,Type 4 protein of light-harvesting complex of photosystem I n=5 Tax=Pinaceae RepID=Q07489_PINSY 0.0
• FL-Next: tr=Lhca4 protein,Type 4 protein of light-harvesting complex of photosystem I; Pinus sylvestris (Scots pine). 0.0
• Blast2go: chlorophyll a-b binding protein 4 precursor homolog 0.0
Complete
biog3_v1.0_unigene64 biogeco3 v1.0 982
• AutoFact: Chlorophyll a-b binding protein type 2 member 1A, chloroplastic n=37 Tax=Spermatophyta RepID=CB2A_PINSY 0.0
• FL-Next: sp=Chlorophyll a-b binding protein type 2 member 1A, chloroplastic; Pinus sylvestris (Scots pine). 0.0
• Blast2go: chlorophyll a b-binding protein 0.0
Complete
biog3_v1.0_unigene388 biogeco3 v1.0 613
• AutoFact: Heat shock protein DnaJ [Medicago truncatula] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
N-terminus
biog3_v1.0_unigene3563 biogeco3 v1.0 1159
• AutoFact: Chloroplast chlorophyll A-B binding protein n=1 Tax=Gossypium hirsutum RepID=C1K5D1_GOSHI 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: chlorophyll a-b binding protein 0.0
Complete
biog3_v1.0_unigene3870 biogeco3 v1.0 298
• AutoFact: Putative lycopene epsilon cyclase n=1 Tax=Daucus carota subsp. sativus RepID=Q2VEX5_DAUCA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: lycopene epsilon cyclase 0.0
Internal
biog3_v1.0_unigene4355 biogeco3 v1.0 1133
• AutoFact: Chlorophyll a-b binding protein type I, chloroplastic n=12 Tax=Pinaceae RepID=CB21_PINTH 0.0
• FL-Next: tr=Chlorophyll a/b-binding protein; Pinus thunbergii (Japanese black pine) (Pinus thunbergiana). 0.0
• Blast2go: chlorophyll a b binding 0.0
Complete
biog3_v1.0_unigene4830 biogeco3 v1.0 524
• AutoFact: Putative lycopene beta cyclase n=38 Tax=Cupressaceae RepID=Q403Q1_TAXDI 0.0
• FL-Next: tr=Putative lycopene beta cyclase; Taxodium distichum var. imbricarium. 0.0
• Blast2go: lycopene beta cyclase 0.0
C-terminus
biog3_v1.0_unigene5892 biogeco3 v1.0 1043
• AutoFact: Type III chlorophyll a /b-binding protein n=2 Tax=Pinaceae RepID=Q02071_PINSY 0.0
• FL-Next: tr=Type III chlorophyll a /b-binding protein; Pinus sylvestris (Scots pine). 0.0
• Blast2go: light-harvesting complex i chlorophyll a b binding protein 3 0.0
Complete
biog3_v1.0_unigene6300 biogeco3 v1.0 352
• AutoFact: Photosystem II 22 kDa protein, chloroplastic n=7 Tax=Solanaceae RepID=PSBS_SOLLC 0.0
• Blast2go: chloroplast chlorophyll a b-binding protein 0.0
unknown
biog3_v1.0_unigene8896 biogeco3 v1.0 680
• AutoFact: Heat shock protein DnaJ [Medicago truncatula] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
Internal
biog3_v1.0_unigene9728 biogeco3 v1.0 512
• AutoFact: Heat shock protein DnaJ [Medicago truncatula] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
C-terminus
biog3_v1.0_unigene11493 biogeco3 v1.0 1259
• AutoFact: Lhcb5 protein n=6 Tax=Pinaceae RepID=Q41040_PINSY 0.0
• FL-Next: tr=Lhcb5 protein; Pinus sylvestris (Scots pine). 0.0
• Blast2go: chlorophyll a-b binding protein chloroplastic-like 0.0
Complete
biog3_v1.0_unigene11517 biogeco3 v1.0 1140
• AutoFact: Chlorophyll a-b binding protein type 2 member 1A, chloroplastic n=37 Tax=Spermatophyta RepID=CB2A_PINSY 0.0
• FL-Next: tr=Chlorophyll a/b binding protein; Pinus contorta (Shore pine) (Lodgepole pine). 0.0
• Blast2go: chloroplast light harvesting chlorophyll a b binding partial 0.0
Complete
biog3_v1.0_unigene11528 biogeco3 v1.0 1176
• AutoFact: Photosystem II 22 kDa protein, chloroplastic n=7 Tax=Solanaceae RepID=PSBS_SOLLC 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: chloroplast chlorophyll a b-binding protein 0.0
Complete
biog3_v1.0_unigene11554 biogeco3 v1.0 991
• AutoFact: Type 1 chlorophyll a /b-binding protein n=1 Tax=Pinus sylvestris RepID=Q02069_PINSY 0.0
• FL-Next: tr=Type 1 chlorophyll a /b-binding protein; Pinus sylvestris (Scots pine). 0.0
• Blast2go: light-harvesting complex i protein lhca1 0.0
Complete
biog3_v1.0_unigene12178 biogeco3 v1.0 1380
• AutoFact: Type II chlorophyll a /b-binding protein n=3 Tax=Pinaceae RepID=Q02070_PINSY 0.0
• FL-Next: tr=Putative chlorophyll A-B binding protein of LHCI type II; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Blast2go: chlorophyll a-b binding protein 0.0
Complete
biog3_v1.0_unigene12227 biogeco3 v1.0 468
• AutoFact: Photosystem II 22 kDa protein, chloroplastic n=7 Tax=Solanaceae RepID=PSBS_SOLLC 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: chloroplast chlorophyll a b-binding protein 0.0
Putative C-terminus
biog3_v1.0_unigene12337 biogeco3 v1.0 872
• AutoFact: Chloroplast ELIP early light-induced protein n=2 Tax=Vitis vinifera RepID=D6QST4_VITVI 8.0e-40
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: early light-inducible protein 0.0
Complete
biog3_v1.0_unigene12353 biogeco3 v1.0 788
• AutoFact: Early light-inducible protein n=3 Tax=Populus trichocarpa RepID=A9PHM1_POPTR 1.99993e-41
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: early light-inducible protein 0.0
Complete
biog3_v1.0_unigene12355 biogeco3 v1.0 725
• AutoFact: Putative early light induced protein 2 n=1 Tax=Camellia sinensis RepID=C9E439_CAMSI 8.0e-40
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: early light-inducible protein 0.0
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain