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Assembly Name: biogeco3 v1.0

Name: Uncharacterised protein family UPF0497, trans-membrane plant

Term: IPR006702  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog3_v1.0_unigene275 biogeco3 v1.0 483
AutoFact: UPF0497 membrane protein 4 n=1 Tax=Picea sitchensis RepID=U4974_PICSI 0.0
FL-Next: sp=CASP-like protein 8; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: salicylic acid-induced fragment 1 protein 0.0
C-terminus
biog3_v1.0_unigene551 biogeco3 v1.0 591
AutoFact: DUF588 multi-domain protein 8.0e-29
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: casp-like protein at2g28370 0.0
N-terminus
biog3_v1.0_unigene1560 biogeco3 v1.0 408
AutoFact: DUF588 multi-domain protein 4.0e-27
Blast2go: casp-like protein at2g28370 0.0
Putative coding
biog3_v1.0_unigene1882 biogeco3 v1.0 285
AutoFact: farnesyl-protein transferase beta subunit [Solanum lycopersicum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: farnesyltransferase beta subunit 0.0
Internal
biog3_v1.0_unigene2127 biogeco3 v1.0 365
AutoFact: protein kinase (PK) [Fagus sylvatica] 2.0e-20
Blast2go: serine threonine-protein kinase ht1-like 3.90518e-27
unknown
biog3_v1.0_unigene3269 biogeco3 v1.0 650
AutoFact: UPF0497 membrane protein 1 n=1 Tax=Picea sitchensis RepID=U4971_PICSI 6.0e-23
FL-Next: sp=CASP-like protein 5; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 7.04015e-28
C-terminus
biog3_v1.0_unigene3501 biogeco3 v1.0 448
AutoFact: UPF0497 membrane protein 5 n=1 Tax=Picea sitchensis RepID=U4975_PICSI 0.0
FL-Next: sp=CASP-like protein 9; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: integral membrane family protein 0.0
Putative N-terminus
biog3_v1.0_unigene5384 biogeco3 v1.0 420
AutoFact: DUF588 multi-domain protein 2.0e-31
Blast2go: uncharacterized protein 0.0
unknown
biog3_v1.0_unigene5656 biogeco3 v1.0 423
AutoFact: flag-tagged protein kinase domain of putative mitogen-activated protein kinase kinase kinase [synthetic construct] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: serine threonine-protein kinase ht1-like 0.0
N-terminus
biog3_v1.0_unigene5958 biogeco3 v1.0 1094
AutoFact: UPF0497 membrane protein 3 n=1 Tax=Picea sitchensis RepID=U4973_PICSI 0.0
FL-Next: sp=CASP-like protein 7; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: uncharacterized protein 0.0
Complete
biog3_v1.0_unigene6766 biogeco3 v1.0 391
AutoFact: DUF588 multi-domain protein 4.0e-27
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: casp-like protein at2g28370 0.0
N-terminus
biog3_v1.0_unigene9691 biogeco3 v1.0 504
AutoFact: DUF588 multi-domain protein 2.0e-31
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: uncharacterized protein 0.0
C-terminus
biog3_v1.0_unigene10043 biogeco3 v1.0 683
AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9LW63.1|PP251_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein At3g23330 dbj|BAB02277.1| unnamed protein product [Arabidopsis thaliana] gb|AEE76753.1| pentatric 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat-containing protein at1g11290-like 0.0
Internal
biog3_v1.0_unigene10252 biogeco3 v1.0 725
AutoFact: UPF0497 membrane protein 5 n=1 Tax=Picea sitchensis RepID=U4975_PICSI 9.80909e-45
FL-Next: tr=Predicted protein; Hordeum vulgare var. distichum (Two-rowed barley). 0.0
Blast2go: integral membrane family protein 0.0
Complete
biog3_v1.0_unigene11150 biogeco3 v1.0 709
AutoFact: UPF0497 membrane protein 1 n=1 Tax=Picea sitchensis RepID=U4971_PICSI 1.99965e-42
FL-Next: sp=CASP-like protein 5; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: integral membrane family protein 0.0
C-terminus
biog3_v1.0_unigene13611 biogeco3 v1.0 485
AutoFact: UPF0497 membrane protein 1 n=1 Tax=Picea sitchensis RepID=U4971_PICSI 6.0e-35
FL-Next: sp=CASP-like protein 5; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 4.05788e-41
C-terminus
biog3_v1.0_unigene13831 biogeco3 v1.0 480
AutoFact: UPF0497 membrane protein 2 n=1 Tax=Picea sitchensis RepID=U4972_PICSI 2.0e-34
FL-Next: sp=CASP-like protein 3; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: salicylic acid-induced fragment 1 protein 0.0
C-terminus
biog3_v1.0_unigene16133 biogeco3 v1.0 178
AutoFact: UPF0497 membrane protein 5 n=1 Tax=Picea sitchensis RepID=U4975_PICSI 0.0
FL-Next: sp=CASP-like protein 9; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: integral membrane family protein 0.0
Internal
biog3_v1.0_unigene17531 biogeco3 v1.0 250
AutoFact: putative protein kinase [Oryza sativa Japonica Group] dbj|BAD44887.1| putative protein kinase [Oryza sativa Japonica Group] gb|EAY72211.1| hypothetical protein OsI_00062 [Oryza sativa Indica Group] gb|EAZ10230.1| hypothetical protein OsJ_00060 [Oryza sati 0.0
Blast2go: serine threonine-protein kinase ht1-like 0.0
Putative coding
biog3_v1.0_unigene17943 biogeco3 v1.0 201
AutoFact: farnesyl-protein transferase beta subunit [Solanum lycopersicum] 0.0
Blast2go: farnesyltransferase beta subunit 0.0
unknown

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain