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Assembly Name: biogeco3 v1.0

Name: 2Fe-2S ferredoxin, iron-sulphur binding site

Term: IPR006058  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog3_v1.0_unigene18006 biogeco3 v1.0 363
AutoFact: pfam01762, Galactosyl_T, Galactosyltransferase 5.60519e-45
Blast2go: avr9 elicitor response protein 0.0
unknown
biog3_v1.0_unigene18359 biogeco3 v1.0 223
AutoFact: Protein kinase APK1B, chloroplast, putative n=1 Tax=Ricinus communis RepID=B9SPN3_RICCO 0.0
Blast2go: protein 0.0
unknown
biog3_v1.0_unigene18674 biogeco3 v1.0 259
AutoFact: RING/FYVE/PHD zinc finger-containing protein [Arabidopsis thaliana] ref|NP_849790.1| RING/FYVE/PHD zinc finger-containing protein [Arabidopsis thaliana] ref|NP_001117462.1| RING/FYVE/PHD zinc finger-containing protein [Arabidopsis thaliana] gb|AAF87887.1| 1.0e-34
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ring fyve phd zinc finger-containing protein 0.0
Internal
biog3_v1.0_unigene19133 biogeco3 v1.0 369
AutoFact: Glycine-rich protein n=1 Tax=Medicago truncatula RepID=A9YWR4_MEDTR 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: uncharacterized protein 0.0
Internal
biog3_v1.0_unigene20263 biogeco3 v1.0 197
AutoFact: putative beta-1,3-galactosyltransferase 2 [Arabidopsis thaliana] gb|AAK63859.1|AF389287_1 At1g05170/YUP8H12_22 [Arabidopsis thaliana] gb|AAB71461.1| Similar to Sequence 10 from patent 5477002 (gb|1253956) [Arabidopsis thaliana] gb|AAM47315.1| At1g05170/YU 0.0
Blast2go: galactosyltransferase family protein 0.0
unknown
biog3_v1.0_unigene20375 biogeco3 v1.0 203
AutoFact: IBR multi-domain protein 5.0e-09
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: zinc finger 0.0
Internal
biog3_v1.0_unigene20851 biogeco3 v1.0 782
AutoFact: heterotrophic ferredoxin 2 [Helianthus annuus] 8.99634e-43
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ferredoxin- chloroplast 0.0
Complete
biog3_v1.0_unigene21110 biogeco3 v1.0 204
AutoFact: Protein kinase APK1B, chloroplast, putative n=1 Tax=Ricinus communis RepID=B9SPN3_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Internal
biog3_v1.0_unigene21273 biogeco3 v1.0 278
AutoFact: Aldehyde oxidase 1 n=1 Tax=Lactuca sativa RepID=Q2PHF4_LACSA 5.0e-22
FL-Next: sp=Putative aldehyde oxidase-like protein; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: aba aldehyde oxidase 6.68114e-26
Internal
biog3_v1.0_unigene21660 biogeco3 v1.0 304
AutoFact: Cytosine-specific methyltransferase (Fragment) n=1 Tax=Vitis vinifera RepID=D7TB44_VITVI 0.0
FL-Next: Isoform 3 of DNA (cytosine-5)-methyltransferase 1B OS=Oryza sativa subsp. japonica GN=MET1B 0.0
Blast2go: dna methyltransferase 0.0
Internal
biog3_v1.0_unigene21836 biogeco3 v1.0 370
AutoFact: Cytosine-specific methyltransferase n=2 Tax=Populus trichocarpa RepID=B9INZ1_POPTR 0.0
FL-Next: Isoform 3 of DNA (cytosine-5)-methyltransferase 1B OS=Oryza sativa subsp. japonica GN=MET1B 0.0
Blast2go: dna methyltransferase 0.0
Internal
biog3_v1.0_unigene21898 biogeco3 v1.0 277
AutoFact: Protein kinase APK1B, chloroplast, putative n=1 Tax=Ricinus communis RepID=B9SPN3_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Internal
biog3_v1.0_unigene22032 biogeco3 v1.0 320
AutoFact: serine/threonine-protein kinase-like protein CCR2 [Arabidopsis thaliana] sp|O80963.1|ACCR2_ARATH RecName: Full=Serine/threonine-protein kinase-like protein CCR2; AltName: Full=Protein CRINKLY 4 RELATED 2; Short=AtCRR2; Flags: Precursor gb|AAC28989.1| puta 5.0e-33
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 7.33471e-36
Internal
biog3_v1.0_unigene23431 biogeco3 v1.0 326
AutoFact: WS00716.B21_A07 WS-PS-N-A-8 Picea glauca cDNA clone WS00716_A07 3', mRNA sequence. 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: c2h2 zinc finger protein 0.0
Putative N-terminus
biog3_v1.0_unigene23728 biogeco3 v1.0 232
AutoFact: putative beta-1,3-galactosyltransferase 2 [Arabidopsis thaliana] gb|AAK63859.1|AF389287_1 At1g05170/YUP8H12_22 [Arabidopsis thaliana] gb|AAB71461.1| Similar to Sequence 10 from patent 5477002 (gb|1253956) [Arabidopsis thaliana] gb|AAM47315.1| At1g05170/YU 0.0
FL-Next: Isoform 2 of Probable beta-1,3-galactosyltransferase 2 OS=Arabidopsis thaliana GN=B3GALT2 0.0
Blast2go: galactosyltransferase family protein 0.0
Putative N-terminus
biog3_v1.0_unigene25140 biogeco3 v1.0 107
AutoFact: DNA (cytosine-5)-methyltransferase 1B n=9 Tax=Poaceae RepID=DNM1B_ORYSJ 1.96182e-44
Blast2go: dna methyltransferase 1.4013e-45
unknown
biog3_v1.0_unigene25369 biogeco3 v1.0 213
AutoFact: Major facilitator protein n=3 Tax=Arabidopsis RepID=Q8H132_ARATH 5.0e-27
Blast2go: protein 1.43495e-30
unknown
biog3_v1.0_unigene25472 biogeco3 v1.0 169
AutoFact: NF-X1-type zinc finger protein NFXL1 n=1 Tax=Harpegnathos saltator RepID=E2BU31_9HYME 3.0e-22
FL-Next: sp=NF-X1-type zinc finger protein NFXL2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 1.5274e-29
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain