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Assembly Name: biogeco3 v1.0

Name: G-patch domain

Term: IPR000467  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog3_v1.0_unigene1016 biogeco3 v1.0 1518
AutoFact: Splicing factor 4-like protein [Arabidopsis thaliana] sp|Q94C11.1|SUGP1_ARATH RecName: Full=SURP and G-patch domain-containing protein 1-like protein; AltName: Full=Splicing factor 4-like protein; Short=SF4-like protein gb|AAK59860.1| AT3g52120/F4F15_230 0.0
FL-Next: sp=SURP and G-patch domain-containing protein 1-like protein; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: swap domain-containing protein 0.0
Complete
biog3_v1.0_unigene3044 biogeco3 v1.0 244
AutoFact: RNA-binding protein, putative n=1 Tax=Ricinus communis RepID=B9T403_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein Sb03g033240; Sorghum bicolor (Sorghum) (Sorghum vulgare). 0.0
Blast2go: rna-binding protein 5 10 0.0
Internal
biog3_v1.0_unigene3889 biogeco3 v1.0 340
AutoFact: D111/G-patch; Zinc finger, C2H2-type [Medicago truncatula] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: d111 g-patch domain-containing protein 0.0
Putative N-terminus
biog3_v1.0_unigene4026 biogeco3 v1.0 395
AutoFact: RNA-binding protein, putative n=1 Tax=Ricinus communis RepID=B9T403_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: rna-binding protein 5 10 0.0
Internal
biog3_v1.0_unigene4849 biogeco3 v1.0 981
AutoFact: Pin2-interacting protein x1, putative n=1 Tax=Ricinus communis RepID=B9T7Y1_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Glycine max (Soybean) (Glycine hispida). 0.0
Blast2go: d111 g-patch domain-containing protein 0.0
Putative N-terminus
biog3_v1.0_unigene4966 biogeco3 v1.0 436
AutoFact: dynamin-related protein 3A [Arabidopsis thaliana] sp|Q8S944.2|DRP3A_ARATH RecName: Full=Dynamin-related protein 3A; AltName: Full=Dynamin-like protein 2; AltName: Full=Dynamin-like protein 2a emb|CAA20578.1| Arabidopsis dynamin-like protein ADL2 [Arabidop 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dynamin-related protein 3a-like 0.0
Internal
biog3_v1.0_unigene5110 biogeco3 v1.0 239
AutoFact: Splicing factor 4-like protein [Arabidopsis thaliana] sp|Q94C11.1|SUGP1_ARATH RecName: Full=SURP and G-patch domain-containing protein 1-like protein; AltName: Full=Splicing factor 4-like protein; Short=SF4-like protein gb|AAK59860.1| AT3g52120/F4F15_230 0.0
Blast2go: swap domain-containing protein 0.0
unknown
biog3_v1.0_unigene5166 biogeco3 v1.0 822
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Glycine max (Soybean) (Glycine hispida). 0.0
Blast2go: uncharacterized protein 0.0
N-terminus
biog3_v1.0_unigene6434 biogeco3 v1.0 700
AutoFact: dynamin-related protein 3A [Arabidopsis thaliana] sp|Q8S944.2|DRP3A_ARATH RecName: Full=Dynamin-related protein 3A; AltName: Full=Dynamin-like protein 2; AltName: Full=Dynamin-like protein 2a emb|CAA20578.1| Arabidopsis dynamin-like protein ADL2 [Arabidop 0.0
FL-Next: sp=Dynamin-related protein 3A; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: dynamin-related protein 3a-like 0.0
Internal
biog3_v1.0_unigene7442 biogeco3 v1.0 394
AutoFact: D111/G-patch; Zinc finger, C2H2-type n=1 Tax=Medicago truncatula RepID=Q2HRQ8_MEDTR 7.0e-32
FL-Next: tr=D111/G-patch; Zinc finger, C2H2-type; Medicago truncatula (Barrel medic) (Medicago tribuloides). 0.0
Blast2go: d111 g-patch domain-containing protein 0.0
Internal
biog3_v1.0_unigene8452 biogeco3 v1.0 194
AutoFact: RNA-binding protein, putative n=1 Tax=Ricinus communis RepID=B9T403_RICCO 0.0
Blast2go: rna-binding protein 5 10 0.0
unknown
biog3_v1.0_unigene8743 biogeco3 v1.0 282
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Selaginella moellendorffii (Spikemoss). 0.0
Blast2go: uncharacterized protein 0.0
Putative C-terminus
biog3_v1.0_unigene10158 biogeco3 v1.0 757
AutoFact: RNA-binding protein, putative n=1 Tax=Ricinus communis RepID=B9T403_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna-binding protein 5 10 0.0
N-terminus
biog3_v1.0_unigene10248 biogeco3 v1.0 422
AutoFact: Zinc finger CCCH domain-containing protein 18 n=4 Tax=Oryza sativa RepID=C3H18_ORYSJ 0.0
FL-Next: sp=Zinc finger CCCH domain-containing protein 18; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: zinc finger ccch domain-containing protein 18-like 0.0
Internal
biog3_v1.0_unigene10353 biogeco3 v1.0 658
AutoFact: Diphthamide biosynthesis protein 1 n=1 Tax=Physcomitrella patens subsp. patens RepID=A9SCT0_PHYPA 0.0
Blast2go: protein 0.0
unknown
biog3_v1.0_unigene10396 biogeco3 v1.0 396
AutoFact: Diphthamide biosynthesis protein 1 n=1 Tax=Physcomitrella patens subsp. patens RepID=A9SCT0_PHYPA 0.0
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: protein 0.0
Internal
biog3_v1.0_unigene17729 biogeco3 v1.0 226
AutoFact: Splicing factor 4-like protein [Arabidopsis thaliana] sp|Q94C11.1|SUGP1_ARATH RecName: Full=SURP and G-patch domain-containing protein 1-like protein; AltName: Full=Splicing factor 4-like protein; Short=SF4-like protein gb|AAK59860.1| AT3g52120/F4F15_230 0.0
Blast2go: swap domain-containing protein 0.0
unknown
biog3_v1.0_unigene18693 biogeco3 v1.0 161
AutoFact: Zinc finger CCCH domain-containing protein 18 n=4 Tax=Oryza sativa RepID=C3H18_ORYSJ 0.0
FL-Next: sp=Zinc finger CCCH domain-containing protein 18; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: zinc finger ccch domain-containing protein 18-like 0.0
Putative C-terminus
biog3_v1.0_unigene19196 biogeco3 v1.0 380
AutoFact: Diphthamide biosynthesis protein 1 n=1 Tax=Physcomitrella patens subsp. patens RepID=A9SCT0_PHYPA 0.0
FL-Next: tr=Putative uncharacterized protein; Selaginella moellendorffii (Spikemoss). 0.0
Blast2go: protein 0.0
Internal
biog3_v1.0_unigene19431 biogeco3 v1.0 238
AutoFact: Pin2-interacting protein x1, putative n=1 Tax=Ricinus communis RepID=B9T7Y1_RICCO 0.0
Blast2go: d111 g-patch domain-containing protein 0.0
unknown

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain