|
Sequence
|
Assembly
|
Length (nt)
|
|
Full-Length
|
|
biog3_v1.0_unigene611
|
biogeco3 v1.0
|
1516
|
|
• AutoFact: Double-stranded RNA-binding protein 6 n=1 Tax=Oryza sativa Japonica Group RepID=DRB6_ORYSJ
|
5.0e-23
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: dsrna-binding protein
|
0.0
|
|
Complete
|
|
biog3_v1.0_unigene1975
|
biogeco3 v1.0
|
1334
|
|
• AutoFact: dsRNA-binding protein [Brassica oleracea var. gongylodes] emb|CAD59428.1| dsRNA-binding protein [Brassica oleracea var. gemmifera]
|
7.00649e-44
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: dsrna-binding protein
|
0.0
|
|
Complete
|
|
biog3_v1.0_unigene3137
|
biogeco3 v1.0
|
401
|
|
• AutoFact: Double-stranded RNA binding protein n=1 Tax=Physcomitrella patens subsp. patens RepID=A9T6H7_PHYPA
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: double-stranded rna binding protein
|
0.0
|
|
Putative N-terminus
|
|
biog3_v1.0_unigene3832
|
biogeco3 v1.0
|
280
|
|
• AutoFact: RecName: Full=Endoribonuclease Dicer homolog 4; AltName: Full=Dicer-like protein 4; Short=OsDCL4; AltName: Full=Protein SHOOT ORGANIZATION 1 gb|ABS32306.1| dicer-like protein [Oryza sativa Japonica Group]
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: dicer-like protein 4
|
0.0
|
|
Internal
|
|
biog3_v1.0_unigene3992
|
biogeco3 v1.0
|
503
|
|
• AutoFact: Double-stranded RNA binding protein, putative n=1 Tax=Ricinus communis RepID=B9RZ63_RICCO
|
0.0
|
|
• Blast2go: rna polymerase ii c-terminal domain phosphatase-like 1-like
|
0.0
|
|
Putative coding
|
|
biog3_v1.0_unigene4115
|
biogeco3 v1.0
|
706
|
|
• AutoFact: Beta-D-glucan exohydrolase n=1 Tax=Nicotiana tabacum RepID=O82151_TOBAC
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: lysosomal beta glucosidase-like
|
0.0
|
|
C-terminus
|
|
biog3_v1.0_unigene5290
|
biogeco3 v1.0
|
466
|
|
• AutoFact: DsRNA-specific nuclease dicer and related ribonuclease n=2 Tax=Physcomitrella patens RepID=A9RV91_PHYPA
|
0.0
|
|
• FL-Next: sp=Endoribonuclease Dicer homolog 1; Oryza sativa subsp. japonica (Rice).
|
0.0
|
|
• Blast2go: endoribonuclease dicer
|
0.0
|
|
Putative C-terminus
|
|
biog3_v1.0_unigene5343
|
biogeco3 v1.0
|
608
|
|
• AutoFact: Double-stranded RNA-binding domain (DsRBD)-containing protein-like n=2 Tax=Oryza sativa RepID=Q6H5U8_ORYSJ
|
0.0
|
|
• FL-Next: sp=RNA polymerase II C-terminal domain phosphatase-like 2; Arabidopsis thaliana (Mouse-ear cress).
|
0.0
|
|
• Blast2go: rna polymerase ii c-terminal domain phosphatase-like 1-like
|
0.0
|
|
Putative C-terminus
|
|
biog3_v1.0_unigene6760
|
biogeco3 v1.0
|
755
|
|
• AutoFact: regulatory associated protein of mTOR [Arabidopsis thaliana] sp|Q93YQ1.1|RTOR1_ARATH RecName: Full=Regulatory-associated protein of TOR 1; AltName: Full=Protein RAPTOR 1; AltName: Full=Protein RAPTOR 1B; Short=AtRaptor1b gb|AAL24320.1| Unknown protein [Ar
|
0.0
|
|
• FL-Next: sp=Regulatory-associated protein of TOR 1; Arabidopsis thaliana (Mouse-ear cress).
|
0.0
|
|
• Blast2go: regulatory-associated protein of tor 1-like
|
0.0
|
|
Internal
|
|
biog3_v1.0_unigene7541
|
biogeco3 v1.0
|
347
|
|
• AutoFact: Double-stranded RNA-binding domain (DsRBD)-containing protein-like n=2 Tax=Oryza sativa RepID=Q6H5U8_ORYSJ
|
0.0
|
|
• FL-Next: sp=RNA polymerase II C-terminal domain phosphatase-like 2; Arabidopsis thaliana (Mouse-ear cress).
|
0.0
|
|
• Blast2go: rna polymerase ii c-terminal domain phosphatase-like 1-like
|
0.0
|
|
Internal
|
|
biog3_v1.0_unigene8908
|
biogeco3 v1.0
|
545
|
|
• AutoFact: ATP-dependent RNA helicase, putative n=1 Tax=Ricinus communis RepID=B9RL32_RICCO
|
0.0
|
|
• FL-Next: tr=ATP-dependent RNA helicase, putative; Ricinus communis (Castor bean).
|
0.0
|
|
• Blast2go: atp-dependent rna
|
0.0
|
|
Internal
|
|
biog3_v1.0_unigene9804
|
biogeco3 v1.0
|
1055
|
|
• AutoFact: BcpLH protein [Brassica rapa subsp. pekinensis] gb|AAT77418.1| dsRNA-binding protein LH-c [Brassica napus]
|
9.0e-13
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: dsrna-binding protein
|
0.0
|
|
C-terminus
|
|
biog3_v1.0_unigene9810
|
biogeco3 v1.0
|
405
|
|
• AutoFact: double-stranded RNA-binding (DsRBD) domain-containing protein [Musa acuminata]
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: dsrna-binding protein 3
|
0.0
|
|
Internal
|
|
biog3_v1.0_unigene10831
|
biogeco3 v1.0
|
744
|
|
• AutoFact: Double-stranded RNA binding protein n=1 Tax=Physcomitrella patens subsp. patens RepID=A9T6H7_PHYPA
|
0.0
|
|
• Blast2go: double-stranded rna binding protein
|
0.0
|
|
Coding
|
|
biog3_v1.0_unigene11791
|
biogeco3 v1.0
|
571
|
|
• AutoFact: double-stranded RNA-binding (DsRBD) domain-containing protein [Musa acuminata]
|
0.0
|
|
• Blast2go: dsrna-binding protein 3
|
0.0
|
|
unknown
|
|
biog3_v1.0_unigene11931
|
biogeco3 v1.0
|
766
|
|
• AutoFact: Glycosyl hydrolase-like protein (Fragment) n=6 Tax=Picea sitchensis RepID=E0Z5X8_PICSI
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: glycosyl hydrolase-like protein
|
0.0
|
|
Internal
|
|
biog3_v1.0_unigene14968
|
biogeco3 v1.0
|
526
|
|
• AutoFact: BcpLH protein [Brassica rapa subsp. pekinensis] gb|AAT77418.1| dsRNA-binding protein LH-c [Brassica napus]
|
5.0e-13
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: dsrna-binding protein
|
0.0
|
|
N-terminus
|
|
biog3_v1.0_unigene15117
|
biogeco3 v1.0
|
181
|
|
• AutoFact: DsRNA-specific nuclease dicer and related ribonuclease n=2 Tax=Physcomitrella patens RepID=A9RV91_PHYPA
|
0.0
|
|
• FL-Next: sp=Endoribonuclease Dicer homolog 1; Arabidopsis thaliana (Mouse-ear cress).
|
0.0
|
|
• Blast2go: endoribonuclease dicer
|
0.0
|
|
Internal
|
|
biog3_v1.0_unigene15163
|
biogeco3 v1.0
|
432
|
|
• AutoFact: protein helicase in vascular tissue and tapetum [Arabidopsis thaliana] gb|AEC08442.1| protein helicase in vascular tissue and tapetum [Arabidopsis thaliana]
|
0.0
|
|
• FL-Next: sp=Probable pre-mRNA-splicing factor ATP-dependent RNA helicase; Arabidopsis thaliana (Mouse-ear cress).
|
0.0
|
|
• Blast2go: nuclear deih-boxhelicase
|
0.0
|
|
Internal
|
|
biog3_v1.0_unigene15168
|
biogeco3 v1.0
|
281
|
|
• AutoFact: regulatory associated protein of mTOR [Arabidopsis thaliana] sp|Q93YQ1.1|RTOR1_ARATH RecName: Full=Regulatory-associated protein of TOR 1; AltName: Full=Protein RAPTOR 1; AltName: Full=Protein RAPTOR 1B; Short=AtRaptor1b gb|AAL24320.1| Unknown protein [Ar
|
0.0
|
|
• FL-Next: sp=Regulatory-associated protein of TOR 2; Arabidopsis thaliana (Mouse-ear cress).
|
0.0
|
|
• Blast2go: regulatory-associated protein of tor 1-like
|
0.0
|
|
Internal
|
