Sustainpine_db
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Assembly Name: biogeco3 v1.0

Name: SMCs flexible hinge

Term: IPR010935  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog3_v1.0_unigene647 biogeco3 v1.0 518
AutoFact: pfam02463, SMC_N, RecF/RecN/SMC N terminal domain 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: smc3 protein 0.0
Putative C-terminus
biog3_v1.0_unigene820 biogeco3 v1.0 430
AutoFact: structural maintenance of chromosomes 1 protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Selaginella moellendorffii (Spikemoss). 0.0
Blast2go: structural maintenance of chromosomes 1 0.0
Internal
biog3_v1.0_unigene869 biogeco3 v1.0 415
AutoFact: structural maintenance of chromosomes (SMC) - like protein [Arabidopsis thaliana] 0.0
FL-Next: sp=Structural maintenance of chromosomes protein 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: structural maintenance of chromosomes 1 0.0
Internal
biog3_v1.0_unigene1067 biogeco3 v1.0 364
AutoFact: pfam06470, SMC_hinge, SMC proteins Flexible Hinge Domain 1.0e-22
FL-Next: sp=Structural maintenance of chromosomes protein 2-2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: condensin complex components subunit 0.0
Internal
biog3_v1.0_unigene6440 biogeco3 v1.0 487
AutoFact: pfam02463, SMC_N, RecF/RecN/SMC N terminal domain 0.0
FL-Next: sp=Structural maintenance of chromosomes protein 2-2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: structural maintenance of chromosomes protein 3-like 0.0
Internal
biog3_v1.0_unigene6566 biogeco3 v1.0 218
AutoFact: putative SMC protein [Oryza sativa Japonica Group] gb|EEC79459.1| hypothetical protein OsI_20467 [Oryza sativa Indica Group] gb|EEE64226.1| hypothetical protein OsJ_19059 [Oryza sativa Japonica Group] 0.0
FL-Next: sp=Structural maintenance of chromosomes protein 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
biog3_v1.0_unigene7633 biogeco3 v1.0 486
AutoFact: pfam02463, SMC_N, RecF/RecN/SMC N terminal domain 3.0e-37
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: condensin complex components subunit 0.0
C-terminus
biog3_v1.0_unigene7706 biogeco3 v1.0 827
AutoFact: putative SMC protein [Oryza sativa Japonica Group] gb|EEC79459.1| hypothetical protein OsI_20467 [Oryza sativa Indica Group] gb|EEE64226.1| hypothetical protein OsJ_19059 [Oryza sativa Japonica Group] 0.0
FL-Next: sp=Structural maintenance of chromosomes protein 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
Putative N-terminus
biog3_v1.0_unigene10349 biogeco3 v1.0 551
AutoFact: putative SMC protein [Oryza sativa Japonica Group] gb|EEC79459.1| hypothetical protein OsI_20467 [Oryza sativa Indica Group] gb|EEE64226.1| hypothetical protein OsJ_19059 [Oryza sativa Japonica Group] 0.0
FL-Next: sp=Structural maintenance of chromosomes protein 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
biog3_v1.0_unigene10623 biogeco3 v1.0 540
AutoFact: structural maintenance of chromosomes 1 protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: structural maintenance of chromosomes 1 0.0
Internal
biog3_v1.0_unigene11237 biogeco3 v1.0 747
AutoFact: Cysteine-type peptidase, putative n=1 Tax=Ricinus communis RepID=B9T2T7_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ubiquitin thioesterase otu1 0.0
C-terminus
biog3_v1.0_unigene11754 biogeco3 v1.0 394
AutoFact: structural maintenance of chromosomes (SMC) - like protein [Arabidopsis thaliana] 0.0
Blast2go: structural maintenance of chromosomes 1 0.0
unknown
biog3_v1.0_unigene14514 biogeco3 v1.0 407
AutoFact: pfam06470, SMC_hinge, SMC proteins Flexible Hinge Domain 1.0e-22
FL-Next: sp=Structural maintenance of chromosomes protein 2-2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: condensin complex components subunit 0.0
Internal
biog3_v1.0_unigene14538 biogeco3 v1.0 208
AutoFact: putative SMC protein [Oryza sativa Japonica Group] gb|EEC79459.1| hypothetical protein OsI_20467 [Oryza sativa Indica Group] gb|EEE64226.1| hypothetical protein OsJ_19059 [Oryza sativa Japonica Group] 0.0
FL-Next: sp=Structural maintenance of chromosomes protein 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
biog3_v1.0_unigene14682 biogeco3 v1.0 292
AutoFact: pfam06470, SMC_hinge, SMC proteins Flexible Hinge Domain 1.0e-22
FL-Next: sp=Structural maintenance of chromosomes protein 2-2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: condensin complex components subunit 0.0
Internal
biog3_v1.0_unigene23325 biogeco3 v1.0 348
AutoFact: putative SMC protein [Oryza sativa Japonica Group] gb|EEC79459.1| hypothetical protein OsI_20467 [Oryza sativa Indica Group] gb|EEE64226.1| hypothetical protein OsJ_19059 [Oryza sativa Japonica Group] 0.0
FL-Next: sp=Structural maintenance of chromosomes protein 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
biog3_v1.0_unigene24305 biogeco3 v1.0 236
AutoFact: structural maintenance of chromosomes 1 protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: structural maintenance of chromosomes 1 0.0
Internal
biog3_v1.0_unigene24440 biogeco3 v1.0 98
AutoFact: pfam06470, SMC_hinge, SMC proteins Flexible Hinge Domain 1.0e-22
Blast2go: condensin complex components subunit 0.0
unknown

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain