Sustainpine_db
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Assembly Name: biogeco3 v1.0

Name: Phytochrome, central region

Term: IPR013515  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog3_v1.0_unigene548 biogeco3 v1.0 381
AutoFact: protein kinase [Spinacia oleracea] 0.0
FL-Next: sp=Phototropin-1A; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: phototropin 2 0.0
Internal
biog3_v1.0_unigene806 biogeco3 v1.0 1104
AutoFact: Phytochrome n=1 Tax=Marchantia paleacea var. diptera RepID=Q9AVP3_MARPA 0.0
FL-Next: sp=Phytochrome; Pinus sylvestris (Scots pine). 0.0
Blast2go: phytochrome 0.0
C-terminus
biog3_v1.0_unigene1831 biogeco3 v1.0 645
AutoFact: Serine/threonine protein kinase, putative n=1 Tax=Ricinus communis RepID=B9SWQ3_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein kinase 0.0
C-terminus
biog3_v1.0_unigene2978 biogeco3 v1.0 615
AutoFact: Caffeate O-methyltransferase n=4 Tax=Picea RepID=Q5NDD5_PICAB 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: caffeate o-methyltransferase 0.0
N-terminus
biog3_v1.0_unigene3814 biogeco3 v1.0 305
AutoFact: Phytochrome n=1 Tax=Marchantia paleacea var. diptera RepID=Q9AVP3_MARPA 0.0
FL-Next: sp=Phytochrome; Pinus sylvestris (Scots pine). 0.0
Blast2go: phytochrome 0.0
Internal
biog3_v1.0_unigene4271 biogeco3 v1.0 288
AutoFact: Serine/threonine protein kinase, putative n=1 Tax=Ricinus communis RepID=B9RKW8_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: phototropin 2 0.0
Internal
biog3_v1.0_unigene4752 biogeco3 v1.0 421
AutoFact: Phytochrome n=12 Tax=Pinaceae RepID=PHY_PICAB 0.0
FL-Next: sp=Phytochrome; Picea abies (Norway spruce) (Picea excelsa). 0.0
Blast2go: phytochrome o 0.0
Internal
biog3_v1.0_unigene4945 biogeco3 v1.0 372
AutoFact: Phytochrome n=12 Tax=Pinaceae RepID=PHY_PICAB 0.0
FL-Next: sp=Phytochrome; Picea abies (Norway spruce) (Picea excelsa). 0.0
Blast2go: phytochrome o 0.0
Internal
biog3_v1.0_unigene5460 biogeco3 v1.0 253
AutoFact: Serine/threonine protein kinase, putative n=1 Tax=Ricinus communis RepID=B9SWQ3_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein kinase 0.0
Internal
biog3_v1.0_unigene8050 biogeco3 v1.0 278
AutoFact: Serine/threonine protein kinase, putative n=1 Tax=Ricinus communis RepID=B9RCZ5_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein kinase g11a-like 0.0
Internal
biog3_v1.0_unigene11140 biogeco3 v1.0 850
AutoFact: Serine/threonine protein kinase, putative n=1 Tax=Ricinus communis RepID=B9RKW8_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: phototropin 2 0.0
N-terminus
biog3_v1.0_unigene12333 biogeco3 v1.0 591
AutoFact: Serine/threonine protein kinase, putative n=1 Tax=Ricinus communis RepID=B9SWQ3_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: serine threonine protein 0.0
Internal
biog3_v1.0_unigene13377 biogeco3 v1.0 443
AutoFact: Serine/threonine protein kinase, putative n=1 Tax=Ricinus communis RepID=B9RKW8_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: phototropin 2 0.0
C-terminus
biog3_v1.0_unigene13467 biogeco3 v1.0 562
AutoFact: Serine/threonine protein kinase, putative n=1 Tax=Ricinus communis RepID=B9SWQ3_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein kinase g11a-like 0.0
Internal
biog3_v1.0_unigene14083 biogeco3 v1.0 515
AutoFact: [RTKL] COG0515 Serine/threonine protein kinase 3.0e-27
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein kinase 0.0
C-terminus
biog3_v1.0_unigene14603 biogeco3 v1.0 159
AutoFact: Phytochrome n=43 Tax=Spermatophyta RepID=PHY_PINSY 0.0
FL-Next: sp=Phytochrome; Pinus sylvestris (Scots pine). 0.0
Blast2go: phytochrome p 0.0
Internal
biog3_v1.0_unigene17740 biogeco3 v1.0 184
AutoFact: Phytochrome n=43 Tax=Spermatophyta RepID=PHY_PINSY 0.0
FL-Next: sp=Phytochrome; Pinus sylvestris (Scots pine). 0.0
Blast2go: phytochrome p 0.0
Internal
biog3_v1.0_unigene18739 biogeco3 v1.0 226
AutoFact: Serine/threonine protein kinase, putative n=1 Tax=Ricinus communis RepID=B9RCZ5_RICCO 0.0
Blast2go: protein kinase g11a-like 0.0
Putative coding
biog3_v1.0_unigene19368 biogeco3 v1.0 211
AutoFact: Phytochrome n=1 Tax=Marchantia paleacea var. diptera RepID=Q9AVP3_MARPA 0.0
FL-Next: sp=Phytochrome; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: phytochrome 0.0
Internal
biog3_v1.0_unigene20273 biogeco3 v1.0 252
AutoFact: PREDICTED: similar to putative serine/threonine protein kinase n=1 Tax=Vitis vinifera RepID=UPI00019841C9 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: serine threonine protein 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain