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Assembly Name: biogeco3 v1.0

Name: Immunoglobulin/major histocompatibility complex, conserved site

Term: IPR003006  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog3_v1.0_unigene435 biogeco3 v1.0 252
AutoFact: Gibberellin regulated protein [Medicago truncatula] 2.0e-34
Blast2go: gibberellin induced protein 1.4013e-45
unknown
biog3_v1.0_unigene568 biogeco3 v1.0 332
AutoFact: ATPase splayed [Arabidopsis thaliana] gb|AEC08101.1| ATPase splayed [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: atpase splayed 0.0
Internal
biog3_v1.0_unigene644 biogeco3 v1.0 434
AutoFact: Protein binding protein, putative n=1 Tax=Ricinus communis RepID=B9R6Q1_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein binding 0.0
Internal
biog3_v1.0_unigene691 biogeco3 v1.0 323
AutoFact: [R] COG2319 FOG: WD40 repeat 4.0e-18
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein spa1-related 3-like 0.0
N-terminus
biog3_v1.0_unigene713 biogeco3 v1.0 1041
AutoFact: Potassium transporter, putative n=1 Tax=Ricinus communis RepID=B9RGU8_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: potassium transporter 0.0
Complete
biog3_v1.0_unigene756 biogeco3 v1.0 564
AutoFact: sphingosine kinase 1 [Arabidopsis thaliana] gb|AAM91597.1| putative protein [Arabidopsis thaliana] gb|AAP31965.1| At4g21540 [Arabidopsis thaliana] gb|AEE84465.1| sphingosine kinase 1 [Arabidopsis thaliana] 0.0
FL-Next: sp=Sphingoid long-chain bases kinase 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 0.0
Internal
biog3_v1.0_unigene796 biogeco3 v1.0 614
AutoFact: Alpha-glucan water dikinase, chloroplastic n=4 Tax=Solanaceae RepID=GWD1_SOLTU 0.0
FL-Next: sp=Alpha-glucan water dikinase, chloroplastic; Solanum tuberosum (Potato). 0.0
Blast2go: alpha-glucan water chloroplastic-like 0.0
C-terminus
biog3_v1.0_unigene926 biogeco3 v1.0 962
AutoFact: Vacuolar sorting protein 39 [Arabidopsis thaliana] gb|AAM20730.1| unknown protein [Arabidopsis thaliana] gb|AEE86679.1| Vacuolar sorting protein 39 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: vam6 vps39-like 0.0
Internal
biog3_v1.0_unigene951 biogeco3 v1.0 345
AutoFact: protein kinase family protein [Arabidopsis thaliana] dbj|BAB02454.1| unnamed protein product [Arabidopsis thaliana] gb|AAU94380.1| At3g19300 [Arabidopsis thaliana] gb|AAV59270.1| At3g19300 [Arabidopsis thaliana] gb|AEE76221.1| protein kinase family protei 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: probable receptor-like protein kinase at1g49730-like 0.0
Internal
biog3_v1.0_unigene976 biogeco3 v1.0 337
AutoFact: Glycosyltransferase family-37 n=2 Tax=Populus RepID=B9HI99_POPTR 0.0
FL-Next: sp=Galactoside 2-alpha-L-fucosyltransferase; Pisum sativum (Garden pea). 0.0
Blast2go: galactoside 2-alpha-l-fucosyltransferase-like 0.0
Internal
biog3_v1.0_unigene1023 biogeco3 v1.0 400
AutoFact: Sialyltransferase-like protein n=2 Tax=Picea RepID=Q4JEY7_PICGL 0.0
Blast2go: sialyltransferase-like protein 0.0
unknown
biog3_v1.0_unigene1032 biogeco3 v1.0 477
AutoFact: putative pentatricopeptide (PPR) repeat-containing protein [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat-containing protein 0.0
Internal
biog3_v1.0_unigene1087 biogeco3 v1.0 323
AutoFact: Pentatricopeptide repeat protein (Fragment) n=1 Tax=Cycas revoluta RepID=B3U1U9_CYCRE 3.0e-37
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat protein 0.0
C-terminus
biog3_v1.0_unigene1214 biogeco3 v1.0 599
AutoFact: Guanine nucleotide-exchange factor n=3 Tax=Arabidopsis RepID=F4IXW2_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: protein 0.0
Internal
biog3_v1.0_unigene1382 biogeco3 v1.0 886
AutoFact: Trehalose-6-phosphate synthase n=1 Tax=Ginkgo biloba RepID=Q5D6D9_GINBI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: trehalose-phosphate synthase 0.0
Complete
biog3_v1.0_unigene1488 biogeco3 v1.0 432
AutoFact: protein kinase domain-containing protein [Arabidopsis thaliana] dbj|BAH19622.1| AT1G49730 [Arabidopsis thaliana] gb|AEE32469.1| protein kinase domain-containing protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: probable receptor-like protein kinase at1g49730-like 0.0
Internal
biog3_v1.0_unigene1542 biogeco3 v1.0 473
AutoFact: ASC1-like protein n=1 Tax=Solanum lycopersicum RepID=ASCL_SOLLC 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: lag1 longevity assurance homolog 3 0.0
Putative C-terminus
biog3_v1.0_unigene1650 biogeco3 v1.0 374
AutoFact: Cystathionine beta-synthase (CBS) protein [Arabidopsis thaliana] gb|AEE34977.1| Cystathionine beta-synthase (CBS) protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: snf1-related protein kinase regulatory subunit gamma-1-like 0.0
Internal
biog3_v1.0_unigene1687 biogeco3 v1.0 587
AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9LW63.1|PP251_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein At3g23330 dbj|BAB02277.1| unnamed protein product [Arabidopsis thaliana] gb|AEE76753.1| pentatric 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Putative C-terminus
biog3_v1.0_unigene1723 biogeco3 v1.0 444
AutoFact: protein kinase family protein [Arabidopsis thaliana] dbj|BAB02454.1| unnamed protein product [Arabidopsis thaliana] gb|AAU94380.1| At3g19300 [Arabidopsis thaliana] gb|AAV59270.1| At3g19300 [Arabidopsis thaliana] gb|AEE76221.1| protein kinase family protei 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: probable receptor-like protein kinase at1g49730-like 0.0
Putative C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain