Sustainpine_db
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Assembly Name: biogeco3 v1.0

Name: Pseudouridine synthase, RsuA and RluB/C/D/E/F

Term: IPR006145  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog3_v1.0_unigene290 biogeco3 v1.0 366
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: uncharacterized protein 0.0
C-terminus
biog3_v1.0_unigene1575 biogeco3 v1.0 411
AutoFact: RNA pseudourine synthase 6 [Arabidopsis thaliana] sp|Q9SVS0.1|PUS6_ARATH RecName: Full=RNA pseudourine synthase 6, chloroplastic; AltName: Full=RNA pseudouridylate synthase 6; AltName: Full=RNA-uridine isomerase 6; Flags: Precursor emb|CAB36821.1| hypothe 2.0e-24
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ribosomal pseudouridine 0.0
Internal
biog3_v1.0_unigene4312 biogeco3 v1.0 995
AutoFact: RNA pseudourine synthase 5 [Arabidopsis thaliana] sp|Q5M721.2|PUS5_ARATH RecName: Full=RNA pseudourine synthase 5; AltName: Full=RNA pseudouridylate synthase 5; AltName: Full=RNA-uridine isomerase 5 gb|AEE78921.1| RNA pseudourine synthase 5 [Arabidopsis t 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna pseudourine synthase 5 0.0
C-terminus
biog3_v1.0_unigene7982 biogeco3 v1.0 990
AutoFact: RNA pseudourine synthase 1 n=1 Tax=Arabidopsis thaliana RepID=PUS1_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna pseudourine synthase 1-like 0.0
C-terminus
biog3_v1.0_unigene15555 biogeco3 v1.0 500
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: uncharacterized protein 0.0
Internal
biog3_v1.0_unigene18638 biogeco3 v1.0 267
AutoFact: Unassigned protein
Blast2go: uncharacterized protein 0.0
Coding
biog3_v1.0_unigene19416 biogeco3 v1.0 360
AutoFact: RNA pseudourine synthase 6 [Arabidopsis thaliana] sp|Q9SVS0.1|PUS6_ARATH RecName: Full=RNA pseudourine synthase 6, chloroplastic; AltName: Full=RNA pseudouridylate synthase 6; AltName: Full=RNA-uridine isomerase 6; Flags: Precursor emb|CAB36821.1| hypothe 0.0
FL-Next: sp=RNA pseudourine synthase 6, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: ribosomal pseudouridine 0.0
C-terminus
biog3_v1.0_unigene19787 biogeco3 v1.0 120
AutoFact: suppressor of variegation1 causing pseudouridine synthase-like protein [Arabidopsis thaliana] gb|AAM66944.1| unknown [Arabidopsis thaliana] dbj|BAC42334.1| unknown protein [Arabidopsis thaliana] gb|AEC09639.1| suppressor of variegation1 causing pseudourid 0.0
Blast2go: protein 0.0
unknown
biog3_v1.0_unigene22970 biogeco3 v1.0 305
AutoFact: RNA pseudourine synthase 4 [Arabidopsis thaliana] sp|Q9LT72.1|PUS4_ARATH RecName: Full=RNA pseudourine synthase 4, mitochondrial; AltName: Full=RNA pseudouridylate synthase 4; AltName: Full=RNA-uridine isomerase 4; Flags: Precursor dbj|BAB02469.1| unnamed 2.0e-37
FL-Next: sp=RNA pseudourine synthase 3, mitochondrial; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: rna pseudourine synthase mitochondrial-like 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain