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Assembly Name: biogeco3 v1.0

Name: Dynamin central domain

Term: IPR000375  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog3_v1.0_unigene856 biogeco3 v1.0 2055
AutoFact: [R] COG0699 Predicted GTPases (dynamin-related) 8.0e-28
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative C-terminus
biog3_v1.0_unigene1462 biogeco3 v1.0 596
AutoFact: Dynamin related protein 4C [Arabidopsis thaliana] gb|AAB71966.1| similar to 'Mx' GTP-binding proteins [Arabidopsis thaliana] gb|AEE33694.1| Dynamin related protein 4C [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Arabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress). 0.0
Blast2go: interferon-induced gtp-binding protein mx 0.0
Internal
biog3_v1.0_unigene3991 biogeco3 v1.0 319
AutoFact: putative GTP-binding protein [Oryza sativa Japonica Group] gb|ABF98531.1| Dynamin-related protein 1C, putative, expressed [Oryza sativa Japonica Group] dbj|BAH01687.1| unnamed protein product [Oryza sativa Japonica Group] gb|EEC76063.1| hypothetical prote 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Internal
biog3_v1.0_unigene4099 biogeco3 v1.0 1443
AutoFact: dynamin-related protein 1E [Arabidopsis thaliana] sp|Q9FNX5.1|DRP1E_ARATH RecName: Full=Dynamin-related protein 1E; AltName: Full=Dynamin-like protein 4; AltName: Full=Dynamin-like protein DLP2; AltName: Full=Dynamin-like protein E gb|AAL16262.1|AF428332_ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dynamin-related protein 1e-like isoform 1 0.0
C-terminus
biog3_v1.0_unigene4966 biogeco3 v1.0 436
AutoFact: dynamin-related protein 3A [Arabidopsis thaliana] sp|Q8S944.2|DRP3A_ARATH RecName: Full=Dynamin-related protein 3A; AltName: Full=Dynamin-like protein 2; AltName: Full=Dynamin-like protein 2a emb|CAA20578.1| Arabidopsis dynamin-like protein ADL2 [Arabidop 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dynamin-related protein 3a-like 0.0
Internal
biog3_v1.0_unigene6434 biogeco3 v1.0 700
AutoFact: dynamin-related protein 3A [Arabidopsis thaliana] sp|Q8S944.2|DRP3A_ARATH RecName: Full=Dynamin-related protein 3A; AltName: Full=Dynamin-like protein 2; AltName: Full=Dynamin-like protein 2a emb|CAA20578.1| Arabidopsis dynamin-like protein ADL2 [Arabidop 0.0
FL-Next: sp=Dynamin-related protein 3A; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: dynamin-related protein 3a-like 0.0
Internal
biog3_v1.0_unigene9775 biogeco3 v1.0 2159
AutoFact: putative dehydratase/deaminase [Oryza sativa Japonica Group] 0.0
FL-Next: sp=Threonine dehydratase biosynthetic, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: threonine dehydratase chloroplastic-like 0.0
Complete
biog3_v1.0_unigene9805 biogeco3 v1.0 531
AutoFact: Dynamin central region; Dynamin GTPase effector [Medicago truncatula] 7.00649e-45
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: dynamin-related protein 3a-like 0.0
C-terminus
biog3_v1.0_unigene9869 biogeco3 v1.0 2464
AutoFact: RecName: Full=Dynamin-related protein 5A; AltName: Full=Soybean dynamin-like protein 5A; Short=SDL5A gb|AAC49183.1| SDL5A [Glycine max] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dynamin-related protein 5a isoform 1 0.0
Complete
biog3_v1.0_unigene10248 biogeco3 v1.0 422
AutoFact: Zinc finger CCCH domain-containing protein 18 n=4 Tax=Oryza sativa RepID=C3H18_ORYSJ 0.0
FL-Next: sp=Zinc finger CCCH domain-containing protein 18; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: zinc finger ccch domain-containing protein 18-like 0.0
Internal
biog3_v1.0_unigene10656 biogeco3 v1.0 1222
AutoFact: [R] COG0699 Predicted GTPases (dynamin-related) 8.0e-28
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
biog3_v1.0_unigene13085 biogeco3 v1.0 833
AutoFact: dynamin-related protein 1E [Arabidopsis thaliana] sp|Q9FNX5.1|DRP1E_ARATH RecName: Full=Dynamin-related protein 1E; AltName: Full=Dynamin-like protein 4; AltName: Full=Dynamin-like protein DLP2; AltName: Full=Dynamin-like protein E gb|AAL16262.1|AF428332_ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dynamin-related protein 1e-like isoform 1 0.0
C-terminus
biog3_v1.0_unigene14744 biogeco3 v1.0 370
AutoFact: similar to dynamin-like protein encoded by GenBank Accession Number X99669 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dynamin-related protein 3a 0.0
Internal
biog3_v1.0_unigene18693 biogeco3 v1.0 161
AutoFact: Zinc finger CCCH domain-containing protein 18 n=4 Tax=Oryza sativa RepID=C3H18_ORYSJ 0.0
FL-Next: sp=Zinc finger CCCH domain-containing protein 18; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: zinc finger ccch domain-containing protein 18-like 0.0
Putative C-terminus
biog3_v1.0_unigene19432 biogeco3 v1.0 194
AutoFact: Dynamin related protein 4C [Arabidopsis thaliana] gb|AAB71966.1| similar to 'Mx' GTP-binding proteins [Arabidopsis thaliana] gb|AEE33694.1| Dynamin related protein 4C [Arabidopsis thaliana] 0.0
FL-Next: tr=Os04g0129900 protein; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: interferon-induced gtp-binding protein mx 0.0
Internal
biog3_v1.0_unigene21240 biogeco3 v1.0 357
AutoFact: Dynamin related protein 4C [Arabidopsis thaliana] gb|AAB71966.1| similar to 'Mx' GTP-binding proteins [Arabidopsis thaliana] gb|AEE33694.1| Dynamin related protein 4C [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: interferon-induced gtp-binding protein mx 0.0
Internal
biog3_v1.0_unigene21244 biogeco3 v1.0 424
AutoFact: Dynamin central region; Dynamin GTPase effector [Medicago truncatula] 0.0
FL-Next: sp=Dynamin-related protein 3A; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: dynamin-related protein 3a-like 0.0
Internal
biog3_v1.0_unigene22606 biogeco3 v1.0 217
AutoFact: Zinc finger CCCH domain-containing protein 18 n=4 Tax=Oryza sativa RepID=C3H18_ORYSJ 0.0
Blast2go: zinc finger ccch domain-containing protein 18-like 0.0
unknown
biog3_v1.0_unigene22773 biogeco3 v1.0 263
AutoFact: Dynamin central region; Dynamin [Medicago truncatula] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Internal
biog3_v1.0_unigene23555 biogeco3 v1.0 222
AutoFact: Dynamin related protein 4C [Arabidopsis thaliana] gb|AAB71966.1| similar to 'Mx' GTP-binding proteins [Arabidopsis thaliana] gb|AEE33694.1| Dynamin related protein 4C [Arabidopsis thaliana] 0.0
Blast2go: interferon-induced gtp-binding protein mx 0.0
Coding

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain