Sustainpine_db
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Assembly Name: biogeco3 v1.0

Name: TonB box, conserved site

Term: IPR010916  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
biog3_v1.0_unigene22849 biogeco3 v1.0 368
• AutoFact: putative pentatricopeptide repeat protein [Gossypium hirsutum] 4.0e-34
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat protein 2.66247e-44
Internal
biog3_v1.0_unigene22883 biogeco3 v1.0 324
• AutoFact: beta-galactosidase [Arabidopsis thaliana] gb|AAM10327.1| At3g54435 [Arabidopsis thaliana] gb|AEE79230.1| beta-galactosidase [Arabidopsis thaliana] 0.0
• FL-Next: tr=Predicted protein; Hordeum vulgare var. distichum (Two-rowed barley). 0.0
• Blast2go: beta-galactosidase 0.0
Internal
biog3_v1.0_unigene22950 biogeco3 v1.0 263
• AutoFact: 3-ketoacyl-CoA synthase n=1 Tax=Picea sitchensis RepID=D5AD26_PICSI 0.0
• FL-Next: sp=3-ketoacyl-CoA synthase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: fatty acid elongase 0.0
Internal
biog3_v1.0_unigene22951 biogeco3 v1.0 220
• AutoFact: KAP multi-domain protein 6.0e-08
• Blast2go: u-box domain-containing protein 4-like 0.0
unknown
biog3_v1.0_unigene22958 biogeco3 v1.0 188
• AutoFact: agmatine deiminase [Arabidopsis thaliana] sp|Q8GWW7.2|AGUA_ARATH RecName: Full=Agmatine deiminase; AltName: Full=Agmatine iminohydrolase; AltName: Full=Protein EMBRYO DEFECTIVE 1873 emb|CAB93718.1| putative protein [Arabidopsis thaliana] gb|AED91261.1| ag 0.0
• Blast2go: agmatine deiminase 0.0
unknown
biog3_v1.0_unigene23286 biogeco3 v1.0 326
• AutoFact: DJ-1_PfpI domain containing protein 5.0e-27
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
Internal
biog3_v1.0_unigene23310 biogeco3 v1.0 176
• AutoFact: coronatine-insensitive 1 [Glycine max] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: coronatine-insensitive protein 1-like 0.0
Internal
biog3_v1.0_unigene23329 biogeco3 v1.0 410
• AutoFact: Glycoside hydrolase, family 17; Virulence factor, pectin lyase fold; X8 [Medicago truncatula] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: glucan endo- -beta-glucosidase 0.0
Internal
biog3_v1.0_unigene23333 biogeco3 v1.0 343
• AutoFact: trihelix DNA binding transcription factor [Arabidopsis thaliana] emb|CAB82933.1| GT2-like protein [Arabidopsis thaliana] gb|AED90641.1| trihelix DNA binding transcription factor [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
Internal
biog3_v1.0_unigene23400 biogeco3 v1.0 378
• AutoFact: phototropic-responsive NPH3-like protein [Arabidopsis thaliana] ref|NP_974103.1| phototropic-responsive NPH3-like protein [Arabidopsis thaliana] ref|NP_001185347.1| phototropic-responsive NPH3-like protein [Arabidopsis thaliana] sp|Q9C9V6.1|Y1790_ARATH Re 0.0
• Blast2go: phototropic-responsive nph3-like protein 0.0
unknown
biog3_v1.0_unigene23522 biogeco3 v1.0 278
• AutoFact: glucan endo-1,3-beta-glucosidase 11 [Arabidopsis thaliana] sp|Q8L868.1|E1311_ARATH RecName: Full=Glucan endo-1,3-beta-glucosidase 11; AltName: Full=(1->3)-beta-glucan endohydrolase 11; Short=(1->3)-beta-glucanase 11; AltName: Full=Beta-1,3-endoglucanase 1 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
C-terminus
biog3_v1.0_unigene23626 biogeco3 v1.0 165
• AutoFact: DUF674 domain containing protein 4.0e-23
• Blast2go: unknow protein 0.0
unknown
biog3_v1.0_unigene23674 biogeco3 v1.0 164
• AutoFact: laccase [Pinus taeda] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: high-pi partial 0.0
Internal
biog3_v1.0_unigene23727 biogeco3 v1.0 227
• AutoFact: U-box domain containing protein 7.0e-15
• FL-Next: sp=U-box domain-containing protein 17; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: protein 0.0
Internal
biog3_v1.0_unigene23754 biogeco3 v1.0 299
• AutoFact: DNA-directed RNA polymerase n=37 Tax=Spermatophyta RepID=C5YGY9_SORBI 0.0
• FL-Next: sp=DNA-directed RNA polymerase II subunit RPB1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
biog3_v1.0_unigene23759 biogeco3 v1.0 1768
• AutoFact: 26S protease regulatory subunit 7 homolog A n=26 Tax=Embryophyta RepID=PRS7A_ARATH 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: regulatory particle triple-a 1a 0.0
Complete
biog3_v1.0_unigene23819 biogeco3 v1.0 103
• AutoFact: ATP-dependent RNA helicase, putative n=1 Tax=Ricinus communis RepID=B9R8Y0_RICCO 0.0
• FL-Next: sp=Probable pre-mRNA-splicing factor ATP-dependent RNA helicase; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: probable pre-mrna-splicing factor atp-dependent rna helicase-like 0.0
Internal
biog3_v1.0_unigene23842 biogeco3 v1.0 302
• AutoFact: uncharacterized protein [Arabidopsis thaliana] gb|AAM13240.1| unknown protein [Arabidopsis thaliana] gb|AAP13389.1| At1g55080 [Arabidopsis thaliana] dbj|BAE99172.1| hypothetical protein [Arabidopsis thaliana] gb|AEE33183.1| uncharacterized protein [Arabid 2.0e-18
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: uncharacterized protein 0.0
N-terminus
biog3_v1.0_unigene23882 biogeco3 v1.0 332
• AutoFact: putative alpha-glucanotransferase [Bacteroides fragilis NCTC 9343] emb|CAH09301.1| putative alpha-glucanotransferase [Bacteroides fragilis NCTC 9343] 0.0
• FL-Next: sp=4-alpha-glucanotransferase DPE2; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: 4-alpha-glucanotransferase 0.0
Internal
biog3_v1.0_unigene23974 biogeco3 v1.0 320
• AutoFact: KAP multi-domain protein 6.0e-08
• Blast2go: u-box domain-containing protein 4-like 0.0
unknown

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain