Sustainpine_db
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Assembly Name: biogeco3 v1.0

Name: TonB box, conserved site

Term: IPR010916  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog3_v1.0_unigene15546 biogeco3 v1.0 542
AutoFact: Glyceraldehyde-3-phosphate dehydrogenase B, chloroplastic n=3 Tax=Arabidopsis RepID=G3PB_ARATH 4.0e-27
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: glyceraldehyde-3-phosphate dehydrogenase 5.59134e-40
Internal
biog3_v1.0_unigene15638 biogeco3 v1.0 187
AutoFact: Unassigned protein
FL-Next: sp=E3 UFM1-protein ligase 1 homolog; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: e3 ufm1-protein ligase 1-like protein 4.53329e-18
Internal
biog3_v1.0_unigene15727 biogeco3 v1.0 206
AutoFact: GTP-binding protein alpha subunit, gna, putative n=1 Tax=Ricinus communis RepID=B9T5D0_RICCO 0.0
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: gtp-binding protein alpha 0.0
Internal
biog3_v1.0_unigene15730 biogeco3 v1.0 373
AutoFact: putative subtilisin serine protease [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: subtilisin-like protease-like 0.0
Internal
biog3_v1.0_unigene15816 biogeco3 v1.0 226
AutoFact: Urease n=1 Tax=Physcomitrella patens subsp. patens RepID=A9TNN7_PHYPA 0.0
FL-Next: sp=Urease; Canavalia ensiformis (Jack bean) (Horse bean). 0.0
Blast2go: urease 0.0
Internal
biog3_v1.0_unigene15880 biogeco3 v1.0 215
AutoFact: Subtilisin-like protease n=2 Tax=Arabidopsis RepID=SUBL_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: subtilisin-like protease 0.0
Internal
biog3_v1.0_unigene15948 biogeco3 v1.0 210
AutoFact: RecName: Full=DEAD-box ATP-dependent RNA helicase 9 0.0
Blast2go: dead-box atp-dependent rna helicase 53-like 0.0
Putative coding
biog3_v1.0_unigene16031 biogeco3 v1.0 198
AutoFact: putative Cdc2-related protein kinase CRK2 [Beta vulgaris] 0.0
Blast2go: cyclin-dependent kinase f-4-like 0.0
unknown
biog3_v1.0_unigene16058 biogeco3 v1.0 211
AutoFact: ATP-binding cassette transporter n=2 Tax=Selaginella moellendorffii RepID=D8RGW5_SELML 0.0
Blast2go: white-brown-complex abc transporter family 0.0
unknown
biog3_v1.0_unigene16096 biogeco3 v1.0 191
AutoFact: vacuolar-sorting receptor 3 [Arabidopsis thaliana] ref|NP_849955.1| vacuolar-sorting receptor 3 [Arabidopsis thaliana] sp|O80977.1|VSR3_ARATH RecName: Full=Vacuolar-sorting receptor 3; Short=AtVSR3; AltName: Full=BP80-like protein a'; Short=AtBP80a'; AltN 0.0
Blast2go: vacuolar-sorting receptor 7-like 0.0
unknown
biog3_v1.0_unigene16180 biogeco3 v1.0 268
AutoFact: Subtilisin-like protease n=2 Tax=Arabidopsis RepID=SUBL_ARATH 0.0
Blast2go: subtilisin-like protease 0.0
unknown
biog3_v1.0_unigene16377 biogeco3 v1.0 232
AutoFact: DNA-directed RNA polymerase n=1 Tax=Physcomitrella patens subsp. patens RepID=A9RSV5_PHYPA 0.0
FL-Next: sp=DNA-directed RNA polymerase; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: dna-directed rna polymerase iii subunit rpc1-like 0.0
Internal
biog3_v1.0_unigene16424 biogeco3 v1.0 335
AutoFact: Glutaredoxin n=2 Tax=rosids RepID=B9GF65_POPTR 3.0e-39
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: grx_c8 - glutaredoxin subgroup iii 0.0
C-terminus
biog3_v1.0_unigene16613 biogeco3 v1.0 111
AutoFact: Mo25 domain containing protein 0.0
Blast2go: protein 0.0
unknown
biog3_v1.0_unigene16633 biogeco3 v1.0 231
AutoFact: Mitogen activated protein kinase 16 n=1 Tax=Selaginella moellendorffii RepID=D8QN49_SELML 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: big map kinase 0.0
Internal
biog3_v1.0_unigene16672 biogeco3 v1.0 310
AutoFact: laccase [Pinus taeda] 0.0
FL-Next: tr=Laccase; Pinus taeda (Loblolly pine). 0.0
Blast2go: high-pi partial 0.0
Internal
biog3_v1.0_unigene16683 biogeco3 v1.0 379
AutoFact: putative subtilisin serine protease [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: subtilisin-like protease-like 0.0
Internal
biog3_v1.0_unigene16811 biogeco3 v1.0 528
AutoFact: Glyceraldehyde-3-phosphate dehydrogenase B, chloroplastic n=3 Tax=Papilionoideae RepID=G3PB_PEA 8.0e-32
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: glyceraldehyde-3-phosphate dehydrogenase 0.0
N-terminus
biog3_v1.0_unigene16815 biogeco3 v1.0 246
AutoFact: poly(A) polymerase 1 [Arabidopsis thaliana] gb|AAF97277.1|AC034106_20 Strong similarity to nuclear poly(A) polymerase from Arabidopsis thaliana gb|AF255297 and contains a Nucleotidyltransferase PF|01909 domain. ESTs gb|AV536592, gb|AV553256, gb|AV561630, 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: poly polymerase 0.0
Internal
biog3_v1.0_unigene16836 biogeco3 v1.0 276
AutoFact: trihelix DNA binding transcription factor [Arabidopsis thaliana] emb|CAB82933.1| GT2-like protein [Arabidopsis thaliana] gb|AED90641.1| trihelix DNA binding transcription factor [Arabidopsis thaliana] 0.0
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: protein 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain