Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: biogeco3 v1.0

Name: TonB box, conserved site

Term: IPR010916  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog3_v1.0_unigene13279 biogeco3 v1.0 477
AutoFact: acetolactate synthase, small subunit, putative [Oryza sativa Japonica Group] gb|ABA92419.1| acetolactate synthase small subunit, putative, expressed [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: acetolactate synthase small subunit 0.0
Complete
biog3_v1.0_unigene13336 biogeco3 v1.0 344
AutoFact: myosin XI [Nicotiana tabacum] 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: myosin-h heavy chain-like 0.0
Internal
biog3_v1.0_unigene13355 biogeco3 v1.0 566
AutoFact: 5'-AMP-activated protein kinase-like protein [Arabidopsis thaliana] gb|AED94476.1| 5'-AMP-activated protein kinase-like protein [Arabidopsis thaliana] 6.0e-20
Blast2go: protein 4.62352e-36
Putative coding
biog3_v1.0_unigene13358 biogeco3 v1.0 419
AutoFact: 3-ketoacyl-CoA synthase n=1 Tax=Ricinus communis RepID=B9T7E3_RICCO 5.0e-31
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
biog3_v1.0_unigene13510 biogeco3 v1.0 479
AutoFact: 50S ribosomal protein L35 n=1 Tax=Picea sitchensis RepID=A9NKM1_PICSI 0.0
FL-Next: sp=50S ribosomal protein L35; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ribosomal protein l35 0.0
Putative Complete
biog3_v1.0_unigene13547 biogeco3 v1.0 327
AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_1.assembly12x (Fragment) n=2 Tax=Vitis vinifera RepID=E0CQ10_VITVI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 1-acyl-sn-glycerol-3-phosphate acyltransferase 0.0
Internal
biog3_v1.0_unigene13563 biogeco3 v1.0 502
AutoFact: unconventional myosin [Helianthus annuus] 0.0
FL-Next: tr=Myosin XI, putative; Ricinus communis (Castor bean). 0.0
Blast2go: myosin-h heavy chain-like 0.0
Internal
biog3_v1.0_unigene13776 biogeco3 v1.0 656
AutoFact: U-box multi-domain protein 3.0e-20
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Internal
biog3_v1.0_unigene13789 biogeco3 v1.0 442
AutoFact: pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [Arabidopsis thaliana] emb|CAB82945.1| ATP-dependent RNA helicase-like protein [Arabidopsis thaliana] gb|AAM53340.1| ATP-dependent RNA helicase-like protein [Arabidopsis thaliana] gb|AAQ56774 0.0
FL-Next: sp=Probable pre-mRNA-splicing factor ATP-dependent RNA helicase; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: pre-mrna-splicing factor atp-dependent rna helicase 0.0
Internal
biog3_v1.0_unigene13799 biogeco3 v1.0 407
AutoFact: WRKY DNA-binding protein [Nicotiana tabacum] 0.0
FL-Next: sp=Probable WRKY transcription factor 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: probable wrky transcription factor 2-like 0.0
Putative N-terminus
biog3_v1.0_unigene13829 biogeco3 v1.0 274
AutoFact: Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger protein [Arabidopsis thaliana] ref|NP_001117233.1| Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger protein [Arabidopsis thaliana] gb|AAF79721.1|AC005106_2 T25N20.3 [Arabidopsis 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
biog3_v1.0_unigene13898 biogeco3 v1.0 537
AutoFact: RecName: Full=Probable cleavage and polyadenylation specificity factor subunit 1; AltName: Full=Cleavage and polyadenylation specificity factor 160 kDa subunit; Short=CPSF 160 kDa subunit emb|CAD39979.2| OSJNBa0032B23.5 [Oryza sativa Japonica Group] 0.0
FL-Next: sp=Probable cleavage and polyadenylation specificity factor subunit 1; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: cleavage and polyadenylation specificity factor subunit 1-like 0.0
Internal
biog3_v1.0_unigene13947 biogeco3 v1.0 426
AutoFact: DNA-directed RNA polymerase n=37 Tax=Spermatophyta RepID=C5YGY9_SORBI 0.0
FL-Next: sp=DNA-directed RNA polymerase; Pinus koraiensis (Korean pine). Plastid; Chloroplast. 0.0
Internal
biog3_v1.0_unigene14050 biogeco3 v1.0 485
AutoFact: 4-methyl-5(b-hydroxyethyl)-thiazole monophosphate biosynthesis [Arabidopsis thaliana] gb|AAF69547.1|AC008007_22 F12M16.18 [Arabidopsis thaliana] gb|AAL07117.1| unknown protein [Arabidopsis thaliana] gb|AAM14123.1| unknown protein [Arabidopsis thaliana] gb 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 4-methyl-5(b-hydroxyethyl)-thiazol monophosphate biosynthesis enzyme 0.0
Internal
biog3_v1.0_unigene14068 biogeco3 v1.0 495
AutoFact: vacuolar-sorting receptor 3 [Arabidopsis thaliana] ref|NP_849955.1| vacuolar-sorting receptor 3 [Arabidopsis thaliana] sp|O80977.1|VSR3_ARATH RecName: Full=Vacuolar-sorting receptor 3; Short=AtVSR3; AltName: Full=BP80-like protein a'; Short=AtBP80a'; AltN 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: vacuolar-sorting receptor 7-like 0.0
C-terminus
biog3_v1.0_unigene14092 biogeco3 v1.0 352
AutoFact: DUF1637 domain containing protein 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 2-aminoethanethiol dioxygenase-like 0.0
C-terminus
biog3_v1.0_unigene14231 biogeco3 v1.0 454
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein Sb03g011780; Sorghum bicolor (Sorghum) (Sorghum vulgare). 0.0
Blast2go: protein 0.0
C-terminus
biog3_v1.0_unigene14261 biogeco3 v1.0 180
AutoFact: 3-ketoacyl-CoA synthase n=4 Tax=rosids RepID=A9PEC4_POPTR 0.0
Blast2go: 3-ketoacyl- synthase 0.0
unknown
biog3_v1.0_unigene14266 biogeco3 v1.0 437
AutoFact: ATP-dependent Clp protease ATP-binding subunit precursor [Oryza sativa Indica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
biog3_v1.0_unigene14321 biogeco3 v1.0 435
AutoFact: U-box domain-containing protein 14 [Arabidopsis thaliana] sp|Q8VZ40.1|PUB14_ARATH RecName: Full=U-box domain-containing protein 14; AltName: Full=E3 ubiquitin-protein ligase PUB14; AltName: Full=Plant U-box protein 14; AltName: Full=Prototypical U-box dom 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Putative C-terminus

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain