Sustainpine_db
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Assembly Name: biogeco3 v1.0

Name: TPP-binding enzyme, conserved site

Term: IPR000399  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
biog3_v1.0_unigene72 biogeco3 v1.0 1923
• AutoFact: Pyruvate decarboxylase 1 n=1 Tax=Lotus corniculatus RepID=Q84V95_LOTCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pyruvate decarboxylase 0.0
Putative Complete
biog3_v1.0_unigene1650 biogeco3 v1.0 374
• AutoFact: Cystathionine beta-synthase (CBS) protein [Arabidopsis thaliana] gb|AEE34977.1| Cystathionine beta-synthase (CBS) protein [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: snf1-related protein kinase regulatory subunit gamma-1-like 0.0
Internal
biog3_v1.0_unigene1693 biogeco3 v1.0 469
• AutoFact: 2-hydroxyacyl-CoA lyase [Arabidopsis thaliana] sp|Q9LF46.1|HACL_ARATH RecName: Full=2-hydroxyacyl-CoA lyase; AltName: Full=2-hydroxyphytanoyl-CoA lyase; Short=2-HPCL; AltName: Full=Oxalyl-CoA decarboxylase emb|CAC01733.1| 2-hydroxyphytanoyl-CoA lyase-like 0.0
• FL-Next: sp=2-hydroxyacyl-CoA lyase; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: 2-hydroxyacyl- lyase-like 0.0
Internal
biog3_v1.0_unigene3084 biogeco3 v1.0 346
• AutoFact: Cystathionine beta-synthase (CBS) protein [Arabidopsis thaliana] gb|AEE34977.1| Cystathionine beta-synthase (CBS) protein [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: snf1-related protein kinase regulatory subunit gamma-1-like 0.0
Internal
biog3_v1.0_unigene3890 biogeco3 v1.0 2120
• AutoFact: Acetolactate synthase n=1 Tax=Picea sitchensis RepID=B8LK99_PICSI 0.0
• FL-Next: sp=Acetolactate synthase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: acetolactate synthase 0.0
C-terminus
biog3_v1.0_unigene6330 biogeco3 v1.0 816
• AutoFact: 2-hydroxyacyl-CoA lyase [Arabidopsis thaliana] sp|Q9LF46.1|HACL_ARATH RecName: Full=2-hydroxyacyl-CoA lyase; AltName: Full=2-hydroxyphytanoyl-CoA lyase; Short=2-HPCL; AltName: Full=Oxalyl-CoA decarboxylase emb|CAC01733.1| 2-hydroxyphytanoyl-CoA lyase-like 0.0
• FL-Next: sp=Acetolactate synthase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: 2-hydroxyacyl- lyase-like 0.0
Putative C-terminus
biog3_v1.0_unigene7073 biogeco3 v1.0 331
• AutoFact: AMP-activated protein kinase, gamma regulatory subunit, putative n=1 Tax=Ricinus communis RepID=B9RAG9_RICCO 0.0
• Blast2go: snf1-related protein kinase regulatory subunit gamma-1-like 0.0
unknown
biog3_v1.0_unigene9434 biogeco3 v1.0 248
• AutoFact: AMP-activated protein kinase, gamma regulatory subunit, putative n=1 Tax=Ricinus communis RepID=B9RAG9_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: snf1-related protein kinase regulatory subunit gamma-1-like 0.0
Internal
biog3_v1.0_unigene10242 biogeco3 v1.0 838
• AutoFact: putative GDSL-motif lipase/hydrolase [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: gdsl esterase lipase 0.0
C-terminus
biog3_v1.0_unigene10987 biogeco3 v1.0 1092
• AutoFact: Zinc finger protein, putative n=1 Tax=Ricinus communis RepID=B9SN62_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: zinc finger 0.0
C-terminus
biog3_v1.0_unigene11609 biogeco3 v1.0 1135
• AutoFact: Zinc finger protein, putative n=1 Tax=Ricinus communis RepID=B9SSI9_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: gdsl esterase lipase 0.0
Putative Complete
biog3_v1.0_unigene13235 biogeco3 v1.0 507
• AutoFact: AMP-activated protein kinase, gamma regulatory subunit, putative n=1 Tax=Ricinus communis RepID=B9RAG9_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: snf1-related protein kinase regulatory subunit gamma-1-like 0.0
Internal
biog3_v1.0_unigene13808 biogeco3 v1.0 346
• AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_61.assembly12x (Fragment) n=3 Tax=Vitis vinifera RepID=D7SN70_VITVI 2.0e-38
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: zinc finger 0.0
Internal
biog3_v1.0_unigene15232 biogeco3 v1.0 235
• AutoFact: Acetolactate synthase n=1 Tax=Picea sitchensis RepID=B8LK99_PICSI 0.0
• FL-Next: sp=Acetolactate synthase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: acetolactate synthase 0.0
Internal
biog3_v1.0_unigene16521 biogeco3 v1.0 232
• AutoFact: Acetolactate synthase (Fragment) n=2 Tax=Sinapis arvensis RepID=Q3ZDQ2_SINAR 6.0e-35
• FL-Next: sp=Acetolactate synthase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: acetolactate synthase 1.23035e-30
Internal
biog3_v1.0_unigene17329 biogeco3 v1.0 265
• AutoFact: Acetolactate synthase n=1 Tax=Picea sitchensis RepID=B8LK99_PICSI 0.0
• Blast2go: acetolactate synthase 0.0
unknown
biog3_v1.0_unigene20561 biogeco3 v1.0 397
• AutoFact: 2-hydroxyacyl-CoA lyase [Arabidopsis thaliana] sp|Q9LF46.1|HACL_ARATH RecName: Full=2-hydroxyacyl-CoA lyase; AltName: Full=2-hydroxyphytanoyl-CoA lyase; Short=2-HPCL; AltName: Full=Oxalyl-CoA decarboxylase emb|CAC01733.1| 2-hydroxyphytanoyl-CoA lyase-like 0.0
• FL-Next: sp=Acetolactate synthase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: 2-hydroxyacyl- lyase-like 0.0
Internal
biog3_v1.0_unigene24747 biogeco3 v1.0 626
• AutoFact: Acetolactate synthase n=1 Tax=Picea sitchensis RepID=B8LK99_PICSI 0.0
• FL-Next: sp=Acetolactate synthase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: acetolactate synthase 0.0
Internal
biog3_v1.0_unigene25200 biogeco3 v1.0 273
• AutoFact: RING-H2 finger protein ATL78 [Arabidopsis thaliana] sp|Q6NQG7.1|ATL78_ARATH RecName: Full=RING-H2 finger protein ATL78 gb|AAQ65112.1| At1g49230 [Arabidopsis thaliana] dbj|BAD43998.1| putative RING zinc finger protein [Arabidopsis thaliana] dbj|BAD44275.1| 5.0e-29
• Blast2go: ring-h2 finger protein 3.27568e-41
Putative coding
biog3_v1.0_unigene26487 biogeco3 v1.0 199
• AutoFact: Zinc finger protein, putative n=1 Tax=Ricinus communis RepID=B9SSI9_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: gdsl esterase lipase 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain