Sustainpine_db
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Assembly Name: biogeco3 v1.0

Name: Reverse transcriptase, RNA-dependent DNA polymerase

Term: IPR013103  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog3_v1.0_unigene15465 biogeco3 v1.0 261
AutoFact: pre-mRNA splicing factor ATP-dependent RNA helicase-like protein [Arabidopsis thaliana] 0.0
FL-Next: sp=Probable pre-mRNA-splicing factor ATP-dependent RNA helicase; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: pre-mrna-splicing factor atp-dependent rna helicase prp16-like 0.0
Internal
biog3_v1.0_unigene15516 biogeco3 v1.0 322
AutoFact: Cinnamoyl CoA reductase n=5 Tax=Populus trichocarpa RepID=B9GMB5_POPTR 0.0
FL-Next: tr=Cinnamoyl-CoA reductase; Pinus taeda (Loblolly pine). 0.0
Blast2go: cinnamoyl reductase 0.0
Internal
biog3_v1.0_unigene15555 biogeco3 v1.0 500
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: uncharacterized protein 0.0
Internal
biog3_v1.0_unigene15730 biogeco3 v1.0 373
AutoFact: putative subtilisin serine protease [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: subtilisin-like protease-like 0.0
Internal
biog3_v1.0_unigene15859 biogeco3 v1.0 308
AutoFact: Copia-type polyprotein, putative n=1 Tax=Arabidopsis thaliana RepID=Q9C536_ARATH 0.0
unknown
biog3_v1.0_unigene15880 biogeco3 v1.0 215
AutoFact: Subtilisin-like protease n=2 Tax=Arabidopsis RepID=SUBL_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: subtilisin-like protease 0.0
Internal
biog3_v1.0_unigene15889 biogeco3 v1.0 102
AutoFact: DUF1336 domain containing protein 0.0
Blast2go: lipid binding 0.0
unknown
biog3_v1.0_unigene16171 biogeco3 v1.0 220
AutoFact: Gag-Pol polyprotein n=4 Tax=Medicago truncatula RepID=B8YLY3_MEDTR 9.0e-21
Blast2go: gag-pol polyprotein 3.50465e-23
unknown
biog3_v1.0_unigene16180 biogeco3 v1.0 268
AutoFact: Subtilisin-like protease n=2 Tax=Arabidopsis RepID=SUBL_ARATH 0.0
Blast2go: subtilisin-like protease 0.0
unknown
biog3_v1.0_unigene16226 biogeco3 v1.0 298
AutoFact: F6N18.1 n=1 Tax=Arabidopsis thaliana RepID=Q9LPK1_ARATH 9.0e-21
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: retrotransposon unclassified 2.71038e-24
Internal
biog3_v1.0_unigene16281 biogeco3 v1.0 217
AutoFact: MRP-like ABC transporter [Oryza sativa Japonica Group] 0.0
FL-Next: sp=ABC transporter C family member 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: multidrug resistance protein abc transporter family 0.0
Internal
biog3_v1.0_unigene16502 biogeco3 v1.0 164
AutoFact: CCAAT-binding transcription factor [Medicago truncatula] 6.0e-35
Blast2go: nuclear transcription factor y subunit a-1 0.0
unknown
biog3_v1.0_unigene16530 biogeco3 v1.0 939
AutoFact: Xyloglucan endotransglucosylase/hydrolase protein 9, putative n=1 Tax=Ricinus communis RepID=B9S9N2_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: xyloglucan endotransglucosylase hydrolase protein 9 0.0
C-terminus
biog3_v1.0_unigene16626 biogeco3 v1.0 274
AutoFact: Unassigned protein
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: hypothetical protein VITISV_015895 [Vitis vinifera] 0.0
Internal
biog3_v1.0_unigene16672 biogeco3 v1.0 310
AutoFact: laccase [Pinus taeda] 0.0
FL-Next: tr=Laccase; Pinus taeda (Loblolly pine). 0.0
Blast2go: high-pi partial 0.0
Internal
biog3_v1.0_unigene16683 biogeco3 v1.0 379
AutoFact: putative subtilisin serine protease [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: subtilisin-like protease-like 0.0
Internal
biog3_v1.0_unigene16854 biogeco3 v1.0 369
AutoFact: RecName: Full=Cytochrome P450 750A1; AltName: Full=Cytochrome P450 CYPC gb|AAX07433.1| cytochrome P450 CYPC [Pinus taeda] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: cytochrome p450 monooxygenase cyp736b 0.0
Internal
biog3_v1.0_unigene16913 biogeco3 v1.0 361
AutoFact: Gypsy/Ty-3 retroelement polyprotein; 69905-74404 n=1 Tax=Arabidopsis thaliana RepID=Q9LHM4_ARATH 0.0
FL-Next: tr=Gypsy/Ty-3 retroelement polyprotein; 69905-74404; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: retrotransposon protein 0.0
Internal
biog3_v1.0_unigene17048 biogeco3 v1.0 500
AutoFact: GK15001 gene product from transcript GK15001-RA 0.0
FL-Next: sp=Retrovirus-related Pol polyprotein from transposon TNT 1-94; Nicotiana tabacum (Common tobacco). 0.0
Blast2go: hypothetical protein VITISV_037436 [Vitis vinifera] 0.0
Internal
biog3_v1.0_unigene17081 biogeco3 v1.0 216
AutoFact: hydrolase, alpha/beta fold family protein [Arabidopsis thaliana] gb|AAK32768.1|AF361600_1 AT5g02970/F9G14_280 [Arabidopsis thaliana] emb|CAB86051.1| putative protein [Arabidopsis thaliana] gb|AAP21157.1| At5g02970/F9G14_280 [Arabidopsis thaliana] gb|AED90 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: alpha beta fold family protein 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain