Sustainpine_db
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Assembly Name: biogeco3 v1.0

Name: Reverse transcriptase, RNA-dependent DNA polymerase

Term: IPR013103  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog3_v1.0_unigene13297 biogeco3 v1.0 568
AutoFact: CW-type zinc-finger protein [Arabidopsis thaliana] dbj|BAC42503.1| unknown protein [Arabidopsis thaliana] gb|AAP21295.1| At4g15730 [Arabidopsis thaliana] gb|AEE83641.1| CW-type zinc-finger protein [Arabidopsis thaliana] 2.0e-07
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: zinc ion binding protein 2.44546e-40
Internal
biog3_v1.0_unigene13299 biogeco3 v1.0 484
AutoFact: Copia-type polyprotein n=1 Tax=Cucumis melo subsp. melo RepID=E5GCE4_CUCME 2.0e-21
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: copia-type polyprotein 1.97976e-26
Putative C-terminus
biog3_v1.0_unigene13418 biogeco3 v1.0 348
AutoFact: alpha-mannosidase [Arabidopsis thaliana] emb|CAA66821.1| alpha-mannosidase [Arabidopsis thaliana] emb|CAA72432.1| alpha-mannosidase precursor [Arabidopsis thaliana] dbj|BAB01735.1| alpha-mannosidase [Arabidopsis thaliana] gb|AAK62592.1| AT3g26720/MLJ15_12 0.0
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: protein 0.0
Internal
biog3_v1.0_unigene13515 biogeco3 v1.0 347
AutoFact: BY-2 kinesin-like protein 5 [Nicotiana tabacum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Putative N-terminus
biog3_v1.0_unigene13519 biogeco3 v1.0 488
AutoFact: ATP binding protein, putative n=1 Tax=Ricinus communis RepID=B9RZ10_RICCO 0.0
FL-Next: tr=ATP binding protein, putative; Ricinus communis (Castor bean). 0.0
Blast2go: shikimate kinase-like protein 0.0
Internal
biog3_v1.0_unigene13546 biogeco3 v1.0 411
AutoFact: RVT_2 domain containing protein 1.0e-14
FL-Next: sp=Retrovirus-related Pol polyprotein from transposon TNT 1-94; Nicotiana tabacum (Common tobacco). 0.0
Blast2go: copia-type polyprotein 0.0
Putative C-terminus
biog3_v1.0_unigene13589 biogeco3 v1.0 367
AutoFact: Retrotransposon protein, putative, unclassified n=1 Tax=Oryza sativa Japonica Group RepID=Q2QXM6_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: retrotransposon unclassified 0.0
Internal
biog3_v1.0_unigene13601 biogeco3 v1.0 494
AutoFact: rhamnogalacturonate lyase-like protein [Arabidopsis thaliana] gb|AEE28513.1| rhamnogalacturonate lyase-like protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
N-terminus
biog3_v1.0_unigene13603 biogeco3 v1.0 427
AutoFact: Glycosyl hydrolase family 38 protein [Arabidopsis thaliana] dbj|BAB10420.1| alpha-mannosidase [Arabidopsis thaliana] gb|AED98165.1| Glycosyl hydrolase family 38 protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: glycosyl hydrolase family 38 protein 0.0
Internal
biog3_v1.0_unigene13615 biogeco3 v1.0 327
AutoFact: GK15001 gene product from transcript GK15001-RA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: hypothetical protein VITISV_037436 [Vitis vinifera] 0.0
Internal
biog3_v1.0_unigene13677 biogeco3 v1.0 336
AutoFact: aarF domain-containing kinase [Arabidopsis thaliana] gb|AAK95302.1|AF410316_1 AT3g24190/MUJ8_17 [Arabidopsis thaliana] dbj|BAB01360.1| unnamed protein product [Arabidopsis thaliana] gb|AAM47311.1| AT3g24190/MUJ8_17 [Arabidopsis thaliana] gb|AEE76870.1| aa 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Internal
biog3_v1.0_unigene13690 biogeco3 v1.0 337
AutoFact: Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=2 Tax=Trichinella spiralis RepID=E5SB91_TRISP 3.0e-21
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: retrovirus-related pol polyprotein from transposon tnt 1-94 5.49244e-27
Internal
biog3_v1.0_unigene13761 biogeco3 v1.0 289
AutoFact: DUF659 domain containing protein 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: dna binding 0.0
Internal
biog3_v1.0_unigene13795 biogeco3 v1.0 439
AutoFact: Cytochrome P450 monooxygenase CYP736B n=3 Tax=Vitis RepID=C0KLZ0_9ROSI 5.0e-21
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: cytochrome p450 monooxygenase cyp736b 5.48413e-34
C-terminus
biog3_v1.0_unigene13809 biogeco3 v1.0 402
AutoFact: Gag-Pol polyprotein n=4 Tax=Medicago truncatula RepID=B8YLY3_MEDTR 0.0
FL-Next: sp=Retrovirus-related Pol polyprotein from transposon TNT 1-94; Nicotiana tabacum (Common tobacco). 0.0
Blast2go: gag-pol polyprotein 0.0
Internal
biog3_v1.0_unigene13887 biogeco3 v1.0 246
AutoFact: Unassigned protein
Blast2go: retrotransposon unclassified 0.0
unknown
biog3_v1.0_unigene13950 biogeco3 v1.0 431
AutoFact: pfam09368, Sas10_Utp3_C, Sas10 C-terminal domain 2.0e-29
Blast2go: something about silencing protein 3.2814e-32
unknown
biog3_v1.0_unigene14052 biogeco3 v1.0 621
AutoFact: hydrolase, alpha/beta fold family protein [Arabidopsis thaliana] gb|AAK32768.1|AF361600_1 AT5g02970/F9G14_280 [Arabidopsis thaliana] emb|CAB86051.1| putative protein [Arabidopsis thaliana] gb|AAP21157.1| At5g02970/F9G14_280 [Arabidopsis thaliana] gb|AED90 0.0
FL-Next: tr=Putative uncharacterized protein; Zea mays (Maize). 0.0
Blast2go: alpha beta fold family protein 0.0
Putative C-terminus
biog3_v1.0_unigene14054 biogeco3 v1.0 262
AutoFact: DNA replication licensing factor MCM3 homolog 1 n=9 Tax=Poaceae RepID=MCM31_MAIZE 0.0
FL-Next: sp=DNA replication licensing factor MCM3 homolog 3; Zea mays (Maize). 0.0
Blast2go: dna replication licensing factor mcm3 homolog 1-like 0.0
Internal
biog3_v1.0_unigene14079 biogeco3 v1.0 314
AutoFact: Syntaxin, putative n=1 Tax=Ricinus communis RepID=B9RPA3_RICCO 0.0
FL-Next: sp=Syntaxin-32; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: qa- syp3 sed5p syntaxin 5-type 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain