Sustainpine_db
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Assembly Name: biogeco3 v1.0

Name: Reverse transcriptase, RNA-dependent DNA polymerase

Term: IPR013103  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog3_v1.0_unigene11129 biogeco3 v1.0 1733
AutoFact: DNA replication licensing factor MCM3 homolog 1 n=9 Tax=Poaceae RepID=MCM31_MAIZE 0.0
FL-Next: sp=DNA replication licensing factor MCM3 homolog 3; Zea mays (Maize). 0.0
Blast2go: dna replication licensing factor mcm3 homolog 1-like 0.0
C-terminus
biog3_v1.0_unigene11278 biogeco3 v1.0 651
AutoFact: Alanyl-tRNA synthetase n=4 Tax=Arabidopsis RepID=SYA_ARATH 0.0
FL-Next: Isoform Cytoplasmic of Alanyl-tRNA synthetase OS=Arabidopsis thaliana GN=ALATS 0.0
Blast2go: alanyl-trna synthetase 0.0
C-terminus
biog3_v1.0_unigene11356 biogeco3 v1.0 367
AutoFact: Retrotransposon protein, putative, unclassified n=1 Tax=Oryza sativa Japonica Group RepID=Q2QXM6_ORYSJ 0.0
Blast2go: retrotransposon unclassified 0.0
unknown
biog3_v1.0_unigene11393 biogeco3 v1.0 416
AutoFact: Gag-pol polyprotein n=7 Tax=Glycine max RepID=Q84VH6_SOYBN 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: gag-pol polyprotein 0.0
Internal
biog3_v1.0_unigene11408 biogeco3 v1.0 475
AutoFact: Gypsy/Ty-3 retroelement polyprotein; 69905-74404 n=1 Tax=Arabidopsis thaliana RepID=Q9LHM4_ARATH 0.0
Blast2go: retrotransposon unclassified 0.0
unknown
biog3_v1.0_unigene11604 biogeco3 v1.0 552
AutoFact: Copia-type polyprotein, putative n=1 Tax=Arabidopsis thaliana RepID=Q9C536_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
biog3_v1.0_unigene11785 biogeco3 v1.0 900
AutoFact: Copia-type polyprotein, putative n=1 Tax=Arabidopsis thaliana RepID=Q9C536_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
biog3_v1.0_unigene11938 biogeco3 v1.0 360
AutoFact: Glycosyl hydrolase family 38 protein [Arabidopsis thaliana] dbj|BAB10420.1| alpha-mannosidase [Arabidopsis thaliana] gb|AED98165.1| Glycosyl hydrolase family 38 protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: lysosomal alpha-mannosidase-like 0.0
Internal
biog3_v1.0_unigene11977 biogeco3 v1.0 324
AutoFact: DNA binding protein, putative n=1 Tax=Ricinus communis RepID=B9RBQ7_RICCO 1.4013e-45
FL-Next: tr=DNA binding protein, putative; Ricinus communis (Castor bean). 0.0
Blast2go: dna binding 0.0
Internal
biog3_v1.0_unigene11992 biogeco3 v1.0 1432
AutoFact: Cinnamoyl CoA reductase n=7 Tax=Populus RepID=B2Z6Q2_POPTR 0.0
FL-Next: tr=Cinnamoyl-CoA reductase; Pinus taeda (Loblolly pine). 0.0
Blast2go: cinnamoyl reductase 0.0
Complete
biog3_v1.0_unigene12030 biogeco3 v1.0 469
AutoFact: alpha-mannosidase [Arabidopsis thaliana] emb|CAA66821.1| alpha-mannosidase [Arabidopsis thaliana] emb|CAA72432.1| alpha-mannosidase precursor [Arabidopsis thaliana] dbj|BAB01735.1| alpha-mannosidase [Arabidopsis thaliana] gb|AAK62592.1| AT3g26720/MLJ15_12 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: protein 0.0
C-terminus
biog3_v1.0_unigene12114 biogeco3 v1.0 1165
AutoFact: Sucrose synthase n=1 Tax=Pinus taeda RepID=A6N837_PINTA 0.0
FL-Next: tr=Sucrose synthase; Pinus taeda (Loblolly pine). 0.0
Blast2go: sucrose synthase 0.0
Putative N-terminus
biog3_v1.0_unigene12196 biogeco3 v1.0 476
AutoFact: ABC transporter E family member 2 n=13 Tax=Spermatophyta RepID=AB2E_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rnase l inhibitor-like protein 0.0
Internal
biog3_v1.0_unigene12219 biogeco3 v1.0 1280
AutoFact: Copia-type polyprotein, putative n=1 Tax=Arabidopsis thaliana RepID=Q9C536_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
biog3_v1.0_unigene12270 biogeco3 v1.0 1157
AutoFact: Copia-type polyprotein, putative n=1 Tax=Arabidopsis thaliana RepID=Q9C536_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
biog3_v1.0_unigene12288 biogeco3 v1.0 550
AutoFact: Copia-type polyprotein, putative n=1 Tax=Arabidopsis thaliana RepID=Q9C536_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete
biog3_v1.0_unigene12326 biogeco3 v1.0 624
AutoFact: S-adenosylmethionine decarboxylase proenzyme n=2 Tax=Picea sitchensis RepID=B8LQ15_PICSI 0.0
FL-Next: sp=S-adenosylmethionine decarboxylase proenzyme; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: s-adenosylmethionine decarboxylase proenzyme 0.0
Putative N-terminus
biog3_v1.0_unigene13086 biogeco3 v1.0 1245
AutoFact: Reverse transcriptase n=1 Tax=Picea glauca RepID=Q9M5J7_PICGL 0.0
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Blast2go: gag-pol polyprotein 0.0
C-terminus
biog3_v1.0_unigene13106 biogeco3 v1.0 463
AutoFact: Gypsy/Ty-3 retroelement polyprotein; 69905-74404 n=1 Tax=Arabidopsis thaliana RepID=Q9LHM4_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: retrotransposon unclassified 0.0
Internal
biog3_v1.0_unigene13214 biogeco3 v1.0 631
AutoFact: DUF1336 domain containing protein 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: lipid binding 0.0
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain