Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: biogeco3 v1.0

Name: Reverse transcriptase, RNA-dependent DNA polymerase

Term: IPR013103  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog3_v1.0_unigene7320 biogeco3 v1.0 325
AutoFact: Ubiquitin carboxyl-terminal hydrolase (Fragment) n=2 Tax=Vitis vinifera RepID=D7U6B4_VITVI 0.0
FL-Next: sp=Ubiquitin carboxyl-terminal hydrolase 5; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
biog3_v1.0_unigene7624 biogeco3 v1.0 1820
AutoFact: KH_1 domain containing protein 5.0e-11
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: poly -binding 0.0
Putative Complete
biog3_v1.0_unigene7724 biogeco3 v1.0 278
AutoFact: RVT_2 domain containing protein 1.0e-14
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: copia-type polyprotein 0.0
Internal
biog3_v1.0_unigene7794 biogeco3 v1.0 946
AutoFact: beta-ketoacyl-ACP synthetase I-2 [Glycine max] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Internal
biog3_v1.0_unigene7830 biogeco3 v1.0 500
AutoFact: putative subtilisin serine protease [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: subtilisin-like protease-like 0.0
Putative C-terminus
biog3_v1.0_unigene7863 biogeco3 v1.0 384
AutoFact: BY-2 kinesin-like protein 5 [Nicotiana tabacum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Internal
biog3_v1.0_unigene8195 biogeco3 v1.0 935
AutoFact: Subtilisin-like protease n=2 Tax=Arabidopsis RepID=SUBL_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: subtilisin-like protease 0.0
Internal
biog3_v1.0_unigene8315 biogeco3 v1.0 1439
AutoFact: Prolyl 4-hydroxylase alpha subunit, putative n=1 Tax=Ricinus communis RepID=B9RSW4_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: prolyl 4-hydroxylase alpha subunit-like protein 0.0
Complete
biog3_v1.0_unigene8547 biogeco3 v1.0 374
AutoFact: subtilisin-like serine protease AIR3-like protein [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Subtilisin-like protein; Picea abies (Norway spruce) (Picea excelsa). 0.0
Blast2go: xylem serine proteinase 1 0.0
C-terminus
biog3_v1.0_unigene8561 biogeco3 v1.0 911
AutoFact: RecName: Full=Cytochrome P450 750A1; AltName: Full=Cytochrome P450 CYPC gb|AAX07433.1| cytochrome P450 CYPC [Pinus taeda] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: cytochrome p450 monooxygenase cyp736b 0.0
C-terminus
biog3_v1.0_unigene8651 biogeco3 v1.0 581
AutoFact: Ubiquitin carboxyl-terminal hydrolase (Fragment) n=2 Tax=Vitis vinifera RepID=D7U6B4_VITVI 0.0
unknown
biog3_v1.0_unigene8654 biogeco3 v1.0 1150
AutoFact: Signal recognition particle subunit srp72, putative n=1 Tax=Ricinus communis RepID=B9RMK3_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: signal recognition particle subunit srp72 0.0
Internal
biog3_v1.0_unigene8705 biogeco3 v1.0 1061
AutoFact: Sucrose synthase n=1 Tax=Pinus taeda RepID=A6N837_PINTA 0.0
FL-Next: tr=Sucrose synthase; Pinus taeda (Loblolly pine). 0.0
Blast2go: sucrose synthase 0.0
C-terminus
biog3_v1.0_unigene8761 biogeco3 v1.0 271
AutoFact: Signal recognition particle subunit srp72, putative n=1 Tax=Ricinus communis RepID=B9RMK3_RICCO 0.0
Blast2go: signal recognition particle subunit srp72 0.0
unknown
biog3_v1.0_unigene8823 biogeco3 v1.0 230
AutoFact: PLAC8 family protein [Arabidopsis thaliana] sp|Q9M9A5.1|PCR6_ARATH RecName: Full=Protein PLANT CADMIUM RESISTANCE 6; Short=AtPCR6 gb|AAF69715.1|AC016041_20 F27J15.18 [Arabidopsis thaliana] gb|AAR24706.1| At1g49030 [Arabidopsis thaliana] gb|AAS47652.1| At1 1.0e-29
Blast2go: protein 1.4013e-45
unknown
biog3_v1.0_unigene8954 biogeco3 v1.0 427
AutoFact: PREDICTED: similar to nucleic acid binding , related n=1 Tax=Vitis vinifera RepID=UPI00019860F7 3.0e-26
FL-Next: sp=Uncharacterized protein At4g26485; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: PREDICTED: uncharacterized protein At4g26485-like [Glycine max] 4.84051e-34
Putative N-terminus
biog3_v1.0_unigene8963 biogeco3 v1.0 422
AutoFact: CCAAT-binding transcription factor [Medicago truncatula] 6.0e-35
Blast2go: nuclear transcription factor y subunit a-1 0.0
Coding
biog3_v1.0_unigene9135 biogeco3 v1.0 460
AutoFact: Glycosyl hydrolase family 38 protein [Arabidopsis thaliana] ref|NP_851037.2| Glycosyl hydrolase family 38 protein [Arabidopsis thaliana] gb|AAM20555.1| alpha-mannosidase [Arabidopsis thaliana] gb|AAN15620.1| alpha-mannosidase [Arabidopsis thaliana] gb|AED 0.0
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: lysosomal alpha-mannosidase 0.0
Internal
biog3_v1.0_unigene9154 biogeco3 v1.0 199
AutoFact: MRP-like ABC transporter [Oryza sativa Japonica Group] 0.0
FL-Next: sp=ABC transporter C family member 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: multidrug resistance protein abc transporter family 0.0
Internal
biog3_v1.0_unigene9183 biogeco3 v1.0 359
AutoFact: rhamnogalacturonate lyase-like protein [Arabidopsis thaliana] gb|AEE28513.1| rhamnogalacturonate lyase-like protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Selaginella moellendorffii (Spikemoss). 0.0
Blast2go: protein 0.0
Internal

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain