Sustainpine_db
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Assembly Name: biogeco3 v1.0

Name: Reverse transcriptase, RNA-dependent DNA polymerase

Term: IPR013103  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog3_v1.0_unigene25017 biogeco3 v1.0 351
AutoFact: Gypsy/Ty-3 retroelement polyprotein; 69905-74404 n=1 Tax=Arabidopsis thaliana RepID=Q9LHM4_ARATH 7.0e-21
FL-Next: tr=Putative retrotransposon protein; Phyllostachys edulis. 0.0
Blast2go: ac069473_8gypsy ty-3 retroelement polyprotein 69905-74404 1.55313e-21
Putative C-terminus
biog3_v1.0_unigene25154 biogeco3 v1.0 265
AutoFact: peroxin 10 [Arabidopsis thaliana] sp|Q9SYU4.1|PEX10_ARATH RecName: Full=Peroxisome biogenesis factor 10; AltName: Full=PER10; AltName: Full=Peroxin-10; AltName: Full=Peroxisomal biogenesis factor 10; Short=AtPEX10; Short=AthPEX10; AltName: Full=Peroxisome 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: peroxisome biogenesis factor 10-like 0.0
Internal
biog3_v1.0_unigene25164 biogeco3 v1.0 214
AutoFact: Retrotransposon protein, putative, unclassified n=1 Tax=Oryza sativa Japonica Group RepID=Q2QLK1_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: retrotransposon unclassified 0.0
Internal
biog3_v1.0_unigene25195 biogeco3 v1.0 132
AutoFact: pfam01699, Na_Ca_ex, Sodium/calcium exchanger protein 3.0e-05
Blast2go: sodium calcium exchanger family protein 0.0
unknown
biog3_v1.0_unigene25311 biogeco3 v1.0 331
AutoFact: [I] COG1022 Long-chain acyl-CoA synthetases (AMP-forming) 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
biog3_v1.0_unigene25341 biogeco3 v1.0 248
AutoFact: tropine dehydrogenase [Arabidopsis thaliana] dbj|BAA98195.1| short chain alcohol dehydrogenase-like [Arabidopsis thaliana] gb|AAO22710.1| putative short chain alcohol dehydrogenase [Arabidopsis thaliana] gb|AAO42448.1| putative short chain alcohol dehydro 0.0
Blast2go: tropinone reductase homolog at1g07440 0.0
unknown
biog3_v1.0_unigene25383 biogeco3 v1.0 102
AutoFact: PPPDE putative thiol peptidase family protein [Arabidopsis thaliana] ref|NP_973987.1| PPPDE putative thiol peptidase family protein [Arabidopsis thaliana] gb|AAL87252.1| unknown protein [Arabidopsis thaliana] gb|AAM45073.1| unknown protein [Arabidopsis th 0.0
Blast2go: upf0326 protein at4g17486-like 0.0
unknown
biog3_v1.0_unigene25391 biogeco3 v1.0 411
AutoFact: DUF659 domain containing protein 3.0e-20
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: uncharacterized protein loc100255241 6.21983e-22
Putative Complete
biog3_v1.0_unigene25424 biogeco3 v1.0 202
AutoFact: LOB domain-containing protein 4 [Arabidopsis thaliana] sp|Q9SHE9.1|LBD4_ARATH RecName: Full=LOB domain-containing protein 4; AltName: Full=ASYMMETRIC LEAVES 2-like protein 6; Short=AS2-like protein 6 gb|AAF24588.1|AC007654_4 T19E23.11 [Arabidopsis thalian 0.0
Blast2go: lob domain-containing protein 4-like 0.0
unknown
biog3_v1.0_unigene25532 biogeco3 v1.0 243
AutoFact: Dynamin central region; Dynamin GTPase effector [Medicago truncatula] 0.0
FL-Next: sp=Dynamin-related protein 3B; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: dynamin-related protein 3a-like 0.0
Internal
biog3_v1.0_unigene25557 biogeco3 v1.0 336
AutoFact: DUF659 domain containing protein 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: PREDICTED: uncharacterized protein LOC100806266 [Glycine max] 3.65739e-43
Internal
biog3_v1.0_unigene25558 biogeco3 v1.0 303
AutoFact: WS02810.BR_M24 SS-IB-A-FL-13 Picea sitchensis cDNA clone WS02810_M24 3, mRNA sequence. 3.0e-35
FL-Next: sp=Retrovirus-related Pol polyprotein from transposon TNT 1-94; Nicotiana tabacum (Common tobacco). 0.0
Blast2go: gag-pol polyprotein 1.40013e-29
Putative C-terminus
biog3_v1.0_unigene25594 biogeco3 v1.0 344
AutoFact: Integrase, catalytic region; Zinc finger, CCHC-type; Peptidase aspartic, catalytic n=1 Tax=Medicago truncatula RepID=Q2HU05_MEDTR 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: gag-pol polyprotein 0.0
Internal
biog3_v1.0_unigene25599 biogeco3 v1.0 233
AutoFact: DUF659 domain containing protein 4.0e-35
FL-Next: tr=Putative uncharacterized protein; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: dna binding 0.0
Internal
biog3_v1.0_unigene25684 biogeco3 v1.0 513
AutoFact: Copia-type polyprotein, putative n=1 Tax=Arabidopsis thaliana RepID=Q9C536_ARATH 0.0
unknown
biog3_v1.0_unigene25696 biogeco3 v1.0 409
AutoFact: HAT family dimerization domain-containing protein n=1 Tax=Arabidopsis thaliana RepID=F4KHA1_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: hat family dimerization domain-containing protein 0.0
C-terminus
biog3_v1.0_unigene25704 biogeco3 v1.0 638
AutoFact: Sucrose synthase n=1 Tax=Pinus taeda RepID=A6N837_PINTA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: sucrose synthase 0.0
Putative C-terminus
biog3_v1.0_unigene25752 biogeco3 v1.0 466
AutoFact: DUF659 multi-domain protein 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: uncharacterized protein loc100247282 0.0
Putative Complete
biog3_v1.0_unigene25754 biogeco3 v1.0 344
AutoFact: pfam01699, Na_Ca_ex, Sodium/calcium exchanger protein 8.0e-17
FL-Next: tr=Putative uncharacterized protein; Oryza sativa subsp. indica (Rice). 0.0
Blast2go: sodium calcium exchanger family protein 0.0
Internal
biog3_v1.0_unigene25763 biogeco3 v1.0 254
AutoFact: Sucrose synthase n=1 Tax=Pinus taeda RepID=A6N837_PINTA 0.0
FL-Next: tr=Sucrose synthase; Pinus taeda (Loblolly pine). 0.0
Blast2go: sucrose synthase 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain