Sustainpine_db
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Assembly Name: biogeco3 v1.0

Name: Reverse transcriptase, RNA-dependent DNA polymerase

Term: IPR013103  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog3_v1.0_unigene21564 biogeco3 v1.0 187
AutoFact: syntaxin of plants 31 [Arabidopsis thaliana] 0.0
FL-Next: sp=Syntaxin-32; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: syntaxin of plants 31 0.0
Internal
biog3_v1.0_unigene21659 biogeco3 v1.0 237
AutoFact: Phospholipid-transporting ATPase (Fragment) n=1 Tax=Cucumis melo subsp. melo RepID=E5GCB8_CUCME 0.0
FL-Next: sp=Putative phospholipid-transporting ATPase 5; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: aminophospholipid atpase 0.0
Internal
biog3_v1.0_unigene21729 biogeco3 v1.0 268
AutoFact: Polyprotein n=1 Tax=Glycine max RepID=Q84ZV5_SOYBN 1.0e-23
FL-Next: sp=Uncharacterized mitochondrial protein AtMg00860; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion. 0.0
Blast2go: retrotransposon unclassified 3.33279e-29
Putative N-terminus
biog3_v1.0_unigene21756 biogeco3 v1.0 306
AutoFact: DENN (AEX-3) domain-containing protein n=2 Tax=Arabidopsis thaliana RepID=F4IUH2_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Selaginella moellendorffii (Spikemoss). 0.0
Blast2go: protein 0.0
Internal
biog3_v1.0_unigene21775 biogeco3 v1.0 306
AutoFact: Dead box ATP-dependent RNA helicase, putative n=1 Tax=Ricinus communis RepID=B9SAD3_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dead box rna helicase 0.0
Putative C-terminus
biog3_v1.0_unigene21818 biogeco3 v1.0 504
AutoFact: helicase associated domain-containing protein [Arabidopsis thaliana] gb|AAK96883.1| ATP-dependent RNA helicase, putative [Arabidopsis thaliana] gb|AAM91118.1| ATP-dependent RNA helicase, putative [Arabidopsis thaliana] gb|AEE30889.1| helicase associated d 3.0e-24
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: atp-dependent rna 1.51155e-30
C-terminus
biog3_v1.0_unigene21828 biogeco3 v1.0 300
AutoFact: putative fatty acyl-CoA reductase 4 [Arabidopsis thaliana] dbj|BAE99400.1| acyl CoA reductase - protein [Arabidopsis thaliana] gb|ACF22894.1| At3g44540 [Arabidopsis thaliana] gb|AEE77913.1| putative fatty acyl-CoA reductase 4 [Arabidopsis thaliana] 1.4013e-45
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Internal
biog3_v1.0_unigene21935 biogeco3 v1.0 384
AutoFact: serine/threonine-protein kinase Nek5 [Arabidopsis thaliana] sp|Q0WPH8.1|NEK5_ARATH RecName: Full=Serine/threonine-protein kinase Nek5; AltName: Full=NimA-related protein kinase 5; Short=AtNEK6; Short=AtNek5 dbj|BAF00971.1| protein kinase like protein [Ara 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: atp binding 0.0
Internal
biog3_v1.0_unigene21944 biogeco3 v1.0 172
AutoFact: syntaxin of plants 31 [Arabidopsis thaliana] 0.0
FL-Next: sp=Syntaxin-32; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: syntaxin of plants 31 0.0
Internal
biog3_v1.0_unigene21971 biogeco3 v1.0 326
AutoFact: Cytochrome P450 n=1 Tax=Petunia x hybrida RepID=Q9MBF5_PETHY 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: cytochrome p450 0.0
Internal
biog3_v1.0_unigene22083 biogeco3 v1.0 160
AutoFact: Dimer_Tnp_hAT domain containing protein 8.0e-11
Blast2go: unknown [Picea sitchensis] 1.02347e-36
unknown
biog3_v1.0_unigene22300 biogeco3 v1.0 273
AutoFact: Putative retroelement pol polyprotein n=1 Tax=Arabidopsis thaliana RepID=Q9SHL9_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: retrotransposon unclassified 0.0
Internal
biog3_v1.0_unigene22661 biogeco3 v1.0 280
AutoFact: Gag-Pol n=1 Tax=Ipomoea batatas RepID=Q6BCY1_IPOBA 1.0e-18
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: uncharacterized protein loc100801364 2.83556e-27
Internal
biog3_v1.0_unigene22769 biogeco3 v1.0 326
AutoFact: Retrotransposon protein, putative, Ty1-copia subclass n=1 Tax=Oryza sativa Japonica Group RepID=Q2RBA0_ORYSJ 1.0e-25
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: retrotransposon ty1-copia subclass 8.22887e-30
N-terminus
biog3_v1.0_unigene22804 biogeco3 v1.0 466
AutoFact: Hemolysin III-related family protein (Fragment) n=1 Tax=Lilium longiflorum RepID=A6MH02_LILLO 3.0e-23
Blast2go: protein 4.8157e-26
unknown
biog3_v1.0_unigene22900 biogeco3 v1.0 329
AutoFact: RecName: Full=Cytochrome P450 750A1; AltName: Full=Cytochrome P450 CYPC gb|AAX07433.1| cytochrome P450 CYPC [Pinus taeda] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: cytochrome p450 monooxygenase cyp736b 0.0
Internal
biog3_v1.0_unigene22947 biogeco3 v1.0 292
AutoFact: Eukaryotic translation initiation factor 2c, putative n=1 Tax=Ricinus communis RepID=B9SP45_RICCO 0.0
FL-Next: tr=Argonaute/Zwille-like protein; Picea glauca (White spruce) (Pinus glauca). 0.0
Blast2go: argonaute-like protein 0.0
Internal
biog3_v1.0_unigene23060 biogeco3 v1.0 236
AutoFact: Synaptotagmin, putative n=1 Tax=Ricinus communis RepID=B9T1N6_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: plant synaptotagmin 0.0
Internal
biog3_v1.0_unigene23093 biogeco3 v1.0 218
AutoFact: Multidrug resistance pump, putative n=1 Tax=Ricinus communis RepID=B9R7N6_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: multidrug resistance 0.0
Internal
biog3_v1.0_unigene23231 biogeco3 v1.0 307
AutoFact: RecName: Full=Cytochrome P450 750A1; AltName: Full=Cytochrome P450 CYPC gb|AAX07433.1| cytochrome P450 CYPC [Pinus taeda] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: cytochrome p450 monooxygenase cyp736b 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain