Sustainpine_db
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Assembly Name: biogeco3 v1.0

Name: Reverse transcriptase, RNA-dependent DNA polymerase

Term: IPR013103  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
biog3_v1.0_unigene20323 biogeco3 v1.0 318
• AutoFact: hydrolase, alpha/beta fold family protein [Arabidopsis thaliana] gb|AAK32768.1|AF361600_1 AT5g02970/F9G14_280 [Arabidopsis thaliana] emb|CAB86051.1| putative protein [Arabidopsis thaliana] gb|AAP21157.1| At5g02970/F9G14_280 [Arabidopsis thaliana] gb|AED90 0.0
• Blast2go: alpha beta fold family protein 0.0
unknown
biog3_v1.0_unigene20462 biogeco3 v1.0 394
• AutoFact: Laccase n=1 Tax=Pinus taeda RepID=Q9AUH9_PINTA 3.0e-38
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: diphenol oxidase 1.82169e-44
C-terminus
biog3_v1.0_unigene20481 biogeco3 v1.0 352
• AutoFact: Putative ripening regulated protein [Oryza sativa Japonica Group] gb|ABF94378.1| MatE family protein, expressed [Oryza sativa Japonica Group] 2.99878e-43
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein TRANSPARENT TESTA 12 0.0
Internal
biog3_v1.0_unigene20537 biogeco3 v1.0 359
• AutoFact: Argonaute/Zwille-like protein n=2 Tax=Picea RepID=Q4PLA9_PICGL 0.0
• FL-Next: tr=Argonaute/Zwille-like protein; Picea glauca (White spruce) (Pinus glauca). 0.0
• Blast2go: protein argonaute 4 0.0
Internal
biog3_v1.0_unigene20589 biogeco3 v1.0 289
• AutoFact: Oxidoreductase, putative n=1 Tax=Ricinus communis RepID=B9SFV3_RICCO 0.0
• FL-Next: sp=Uncharacterized PKHD-type hydroxylase At1g22950; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: uncharacterized pkhd-type hydroxylase at1g22950-like 0.0
Internal
biog3_v1.0_unigene20615 biogeco3 v1.0 316
• AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Picea abies RepID=Q9FY10_PICAB 8.0e-28
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: reverse transcriptase 1.72695e-36
Internal
biog3_v1.0_unigene20683 biogeco3 v1.0 316
• AutoFact: Protein SEY1, putative n=1 Tax=Ricinus communis RepID=B9SN36_RICCO 0.0
• Blast2go: protein root hair defective 3 homolog 1-like 0.0
unknown
biog3_v1.0_unigene20737 biogeco3 v1.0 289
• AutoFact: Hemolysin III-related family protein (Fragment) n=1 Tax=Lilium longiflorum RepID=A6MH02_LILLO 3.0e-23
• Blast2go: protein 4.8157e-26
unknown
biog3_v1.0_unigene20786 biogeco3 v1.0 321
• AutoFact: Polyprotein n=1 Tax=Glycine max RepID=Q84ZV5_SOYBN 2.0e-21
• FL-Next: sp=Uncharacterized mitochondrial protein AtMg00860; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion. 0.0
• Blast2go: retrotransposon unclassified 6.55626e-26
Putative N-terminus
biog3_v1.0_unigene20892 biogeco3 v1.0 232
• AutoFact: Retrotransposon protein, putative, unclassified n=1 Tax=Oryza sativa Japonica Group RepID=Q2QLK1_ORYSJ 1.0e-35
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: retrotransposon unclassified 2.18061e-35
Putative C-terminus
biog3_v1.0_unigene20962 biogeco3 v1.0 202
• AutoFact: putative CCAAT-binding transcription factor [Oryza sativa Japonica Group] 3.0e-40
• Blast2go: protein 0.0
Coding
biog3_v1.0_unigene21004 biogeco3 v1.0 353
• AutoFact: CemA-like proton extrusion protein-like protein [Arabidopsis thaliana] gb|AAL85996.1| unknown protein [Arabidopsis thaliana] gb|AAP04130.1| unknown protein [Arabidopsis thaliana] dbj|BAD43184.1| unknown protein [Arabidopsis thaliana] dbj|BAD43308.1| unkno 0.0
• FL-Next: sp=envelope membrane protein, chloroplastic; Larix occidentalis (Western larch). Plastid; Chloroplast. 0.0
• Blast2go: protein 0.0
C-terminus
biog3_v1.0_unigene21021 biogeco3 v1.0 241
• AutoFact: CCAAT-binding transcription factor [Medicago truncatula] 6.0e-35
• Blast2go: nuclear transcription factor y subunit a-1 0.0
unknown
biog3_v1.0_unigene21064 biogeco3 v1.0 311
• AutoFact: Putative polyprotein n=1 Tax=Oryza sativa Japonica Group RepID=Q7Y141_ORYSJ 2.0e-11
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: retrotransposon unclassified 2.79326e-13
Internal
biog3_v1.0_unigene21080 biogeco3 v1.0 335
• AutoFact: RecName: Full=Cytochrome P450 750A1; AltName: Full=Cytochrome P450 CYPC gb|AAX07433.1| cytochrome P450 CYPC [Pinus taeda] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: cytochrome p450 monooxygenase cyp736b 0.0
C-terminus
biog3_v1.0_unigene21164 biogeco3 v1.0 392
• AutoFact: Lipid binding protein, putative n=1 Tax=Ricinus communis RepID=B9SC17_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein Sb07g021510; Sorghum bicolor (Sorghum) (Sorghum vulgare). 0.0
• Blast2go: uncharacterized protein 0.0
Internal
biog3_v1.0_unigene21244 biogeco3 v1.0 424
• AutoFact: Dynamin central region; Dynamin GTPase effector [Medicago truncatula] 0.0
• FL-Next: sp=Dynamin-related protein 3A; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: dynamin-related protein 3a-like 0.0
Internal
biog3_v1.0_unigene21427 biogeco3 v1.0 326
• AutoFact: Lipid binding protein, putative n=1 Tax=Ricinus communis RepID=B9S1J0_RICCO 0.0
• FL-Next: tr=Lipid binding protein, putative; Ricinus communis (Castor bean). 0.0
• Blast2go: enhanced disease resistance 2 protein 0.0
N-terminus
biog3_v1.0_unigene21536 biogeco3 v1.0 263
• AutoFact: Pol protein integrase region (Fragment) n=1 Tax=Pinus brutia RepID=Q9M6N4_9CONI 5.0e-37
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Blast2go: pol protein integrase region 0.0
Putative C-terminus
biog3_v1.0_unigene21542 biogeco3 v1.0 165
• AutoFact: Copia-type polyprotein, putative n=1 Tax=Arabidopsis thaliana RepID=Q9C536_ARATH 0.0
unknown

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain