Sustainpine_db
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Assembly Name: biogeco3 v1.0

Name: Reverse transcriptase, RNA-dependent DNA polymerase

Term: IPR013103  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
biog3_v1.0_unigene18376 biogeco3 v1.0 315
• AutoFact: ripening regulated protein DDTFR18 [Solanum lycopersicum] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: multidrug resistance 0.0
Internal
biog3_v1.0_unigene18432 biogeco3 v1.0 321
• AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Cycas revoluta RepID=Q4JQ46_CYCRE 3.0e-24
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
• Blast2go: reverse transcriptase 1.49367e-26
Internal
biog3_v1.0_unigene18501 biogeco3 v1.0 116
• AutoFact: putative CCAAT-binding transcription factor [Oryza sativa Japonica Group] 9.0e-29
• Blast2go: nuclear transcription factor y subunit a-9-like 0.0
unknown
biog3_v1.0_unigene18531 biogeco3 v1.0 312
• AutoFact: putative inositol 1,3,4-trisphosphate 5/6-kinase [Oryza sativa Japonica Group] dbj|BAD54694.1| putative inositol 1,3,4-trisphosphate 5/6-kinase [Oryza sativa Japonica Group] 0.0
• FL-Next: sp=Inositol-tetrakisphosphate 1-kinase 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: inositol-tetrakisphosphate 1-kinase 4-like 0.0
Internal
biog3_v1.0_unigene18638 biogeco3 v1.0 267
• AutoFact: Unassigned protein
• Blast2go: uncharacterized protein 0.0
Coding
biog3_v1.0_unigene18795 biogeco3 v1.0 195
• AutoFact: serine protease-like protein [Nicotiana tabacum] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: subtilisin-like protease-like 0.0
Internal
biog3_v1.0_unigene18800 biogeco3 v1.0 163
• AutoFact: RING/U-box domain-containing protein [Arabidopsis thaliana] ref|NP_974832.1| RING/U-box domain-containing protein [Arabidopsis thaliana] gb|AAM97093.1| RING finger-like protein [Arabidopsis thaliana] gb|AAT47817.1| At5g24870 [Arabidopsis thaliana] gb|AED9 1.0e-32
• Blast2go: ring u-box domain-containing protein 1.4013e-45
unknown
biog3_v1.0_unigene18808 biogeco3 v1.0 417
• AutoFact: Copia-like retrotransposable element n=1 Tax=Arabidopsis thaliana RepID=Q9LH44_ARATH 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: retrotransposon unclassified 0.0
Internal
biog3_v1.0_unigene18838 biogeco3 v1.0 146
• AutoFact: MRP-like ABC transporter [Oryza sativa Japonica Group] 0.0
• FL-Next: sp=ABC transporter C family member 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: multidrug resistance protein abc transporter family 0.0
Internal
biog3_v1.0_unigene18951 biogeco3 v1.0 235
• AutoFact: putative inositol 1,3,4-trisphosphate 5/6-kinase [Oryza sativa Japonica Group] dbj|BAD54694.1| putative inositol 1,3,4-trisphosphate 5/6-kinase [Oryza sativa Japonica Group] 0.0
• Blast2go: inositol-tetrakisphosphate 1-kinase 4-like 0.0
unknown
biog3_v1.0_unigene19061 biogeco3 v1.0 368
• AutoFact: CCAAT-binding transcription factor [Medicago truncatula] 6.0e-35
• Blast2go: nuclear transcription factor y subunit a-1 0.0
unknown
biog3_v1.0_unigene19137 biogeco3 v1.0 238
• AutoFact: Cyclin-T1-4 n=2 Tax=Oryza sativa Japonica Group RepID=CCT14_ORYSJ 0.0
• FL-Next: sp=Cyclin-T1-4; Oryza sativa subsp. japonica (Rice). 0.0
• Blast2go: protein 0.0
Internal
biog3_v1.0_unigene19289 biogeco3 v1.0 394
• AutoFact: S-adenosylmethionine-dependent methyltransferase, putative n=1 Tax=Ricinus communis RepID=B9RWD4_RICCO 0.0
• FL-Next: tr=S-adenosylmethionine-dependent methyltransferase, putative; Ricinus communis (Castor bean). 0.0
• Blast2go: methyltransferase-like protein 13-like 0.0
Internal
biog3_v1.0_unigene19295 biogeco3 v1.0 288
• AutoFact: pre-mRNA splicing factor ATP-dependent RNA helicase-like protein [Arabidopsis thaliana] 0.0
• FL-Next: sp=Probable pre-mRNA-splicing factor ATP-dependent RNA helicase; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: pre-mrna-splicing factor atp-dependent rna helicase prp16-like 0.0
Internal
biog3_v1.0_unigene19409 biogeco3 v1.0 261
• AutoFact: Copia-type polyprotein, putative n=1 Tax=Arabidopsis thaliana RepID=Q9C536_ARATH 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
biog3_v1.0_unigene19472 biogeco3 v1.0 163
• AutoFact: DUF547 domain containing protein 1.0e-14
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ternary complex factor mip1-like 0.0
Internal
biog3_v1.0_unigene19528 biogeco3 v1.0 260
• AutoFact: Gypsy/Ty-3 retroelement polyprotein; 69905-74404 n=1 Tax=Arabidopsis thaliana RepID=Q9LHM4_ARATH 0.0
• Blast2go: retrotransposon unclassified 0.0
Putative coding
biog3_v1.0_unigene20044 biogeco3 v1.0 223
• AutoFact: putative inositol 1,3,4-trisphosphate 5/6-kinase [Oryza sativa Japonica Group] dbj|BAD54694.1| putative inositol 1,3,4-trisphosphate 5/6-kinase [Oryza sativa Japonica Group] 0.0
• FL-Next: sp=Inositol-tetrakisphosphate 1-kinase 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: inositol-tetrakisphosphate 1-kinase 4-like 0.0
Internal
biog3_v1.0_unigene20065 biogeco3 v1.0 167
• AutoFact: beta-ketoacyl-ACP synthetase I-2 [Glycine max] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
Internal
biog3_v1.0_unigene20078 biogeco3 v1.0 304
• AutoFact: RecName: Full=Cyclin-T1-3; Short=CycT1;3 gb|AAX92940.1| Cyclin, N-terminal domain, putative [Oryza sativa Japonica Group] gb|EEC67709.1| hypothetical protein OsI_35185 [Oryza sativa Indica Group] 0.0
• Blast2go: cyclin-t1-5-like isoform 1 0.0
unknown

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain