Sustainpine_db
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Assembly Name: SustainPine v1.2

Name: RNA ligase (ATP).

Term: EC:6.5.1.3  Help

Source: EC from Blast2go


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v1.2_unigene28101 SustainPine v1.2 626
AutoFact: RNA ligase isoform 1 [Triticum aestivum] 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: rna ligase 0.0
Internal
sp_v1.2_unigene28167 SustainPine v1.2 407
AutoFact: WS0274.B21_I24 SS-IL-A-FL-14 Picea sitchensis cDNA clone WS0274_I24 5, mRNA sequence. 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: translation elongation factor ef-1 alpha 0.0
C-terminus
sp_v1.2_unigene36576 SustainPine v1.2 484
AutoFact: RNA ligase [Arabidopsis thaliana] ref|NP_001154320.1| RNA ligase [Arabidopsis thaliana] dbj|BAF02126.1| translation elongation factor EF-1 alpha [Arabidopsis thaliana] gb|AEE28210.1| RNA ligase [Arabidopsis thaliana] gb|AEE28211.1| RNA ligase [Arabidopsis 4.0e-37
FL-Next: tr=Putative uncharacterized protein; Ricinus communis (Castor bean). 0.0
Blast2go: rna ligase 1.31862e-42
Internal
sp_v1.2_unigene51379 SustainPine v1.2 296
AutoFact: RNA ligase isoform 1 [Triticum aestivum] 8.0e-22
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: rna ligase 6.93723e-28
Internal
sp_v1.2_unigene58274 SustainPine v1.2 751
AutoFact: RNA ligase isoform 1 [Triticum aestivum] 0.0
FL-Next: tr=Putative uncharacterized protein Sb02g005590; Sorghum bicolor (Sorghum) (Sorghum vulgare). 0.0
Blast2go: translation elongation factor ef-1 alpha 0.0
Putative C-terminus
sp_v1.2_unigene62077 SustainPine v1.2 284
AutoFact: WS0274.B21_I24 SS-IL-A-FL-14 Picea sitchensis cDNA clone WS0274_I24 5, mRNA sequence. 1.00053e-42
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: translation elongation factor ef-1 alpha 1.80763e-18
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain