Sustainpine_db
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Assembly Name: SustainPine v1.2

Name: negative regulation of transcription from RNA polymerase II promoter

Term: GO:0000122  Help

Source: GO from Blast2go

Ontology: Biological Process

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v1.2_unigene12701 SustainPine v1.2 251
• AutoFact: PREDICTED: catenin (cadherin-associated protein), beta 1, 88kDa isoform 2 n=1 Tax=Pan troglodytes RepID=UPI0000E1FC25 4.0e-29
• Blast2go: catenin beta-1 6.74061e-29
Putative coding
sp_v1.2_unigene34554 SustainPine v1.2 526
• AutoFact: Nucleosome remodeling factor n=2 Tax=Chlamydomonadales RepID=A8J5R1_CHLRE 1.0e-34
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: unknown 0.0
N-terminus
sp_v1.2_unigene45195 SustainPine v1.2 237
• AutoFact: Calreticulin n=1 Tax=Polysphondylium pallidum RepID=D3BIF1_POLPA 1.0e-28
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: calreticulin 2.88424e-35
Internal
sp_v1.2_unigene62143 SustainPine v1.2 668
• AutoFact: C-myb-like transcription factor (Fragment) n=1 Tax=Adiantum raddianum RepID=Q9LD63_ADIRA 2.0e-30
• FL-Next: tr=R2R3-MYB transcription factor MYB3; Pinus taeda (Loblolly pine). 0.0
• Blast2go: myb domain protein 3r-5 9.11857e-15
Putative N-terminus
sp_v1.2_unigene70166 SustainPine v1.2 406
• AutoFact: PREDICTED: 40S ribosomal protein S14-like n=1 Tax=Nomascus leucogenys RepID=UPI00020AD71F 2.0e-33
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: 40s ribosomal protein s14 2.94233e-07
Putative Complete
sp_v1.2_unigene82293 SustainPine v1.2 595
• AutoFact: WD-40 repeat family protein [Arabidopsis thaliana] dbj|BAB09017.1| unnamed protein product [Arabidopsis thaliana] gb|AAL15328.1| AT5g67320/K8K14_4 [Arabidopsis thaliana] gb|AAN28871.1| At5g67320/K8K14_4 [Arabidopsis thaliana] gb|AED98328.1| WD-40 repeat f 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain