Sustainpine_db
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Assembly Name: SustainPine v1.2

Name: nuclear chromatin

Term: GO:0000790  Help

Source: GO from Blast2go

Ontology: Cellular Component


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v1.2_unigene7626 SustainPine v1.2 1781
AutoFact: RPA 70kDa subunit [Pisum sativum] 0.0
FL-Next: tr=Putative glycine-rich protein; Picea glauca (White spruce) (Pinus glauca). 0.0
Blast2go: replication factor a1 0.0
Complete
sp_v1.2_unigene8486 SustainPine v1.2 144
AutoFact: DNA mismatch repair protein MLH1 [Arabidopsis thaliana] emb|CAA10163.1| MLH1 protein [Arabidopsis thaliana] emb|CAB78038.1| MLH1 protein [Arabidopsis thaliana] gb|AEE82726.1| DNA mismatch repair protein MLH1 [Arabidopsis thaliana] 1.0e-08
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: dna mismatch repair and recombination 3.26557e-10
Internal
sp_v1.2_unigene13778 SustainPine v1.2 348
AutoFact: RPA 70kDa subunit [Pisum sativum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Putative Complete
sp_v1.2_unigene14176 SustainPine v1.2 1370
AutoFact: Replication factor A 1, rfa1, putative n=1 Tax=Ricinus communis RepID=B9RK18_RICCO 0.0
FL-Next: tr=RPA 70kDa subunit; Pisum sativum (Garden pea). 0.0
Blast2go: replication factor a1 0.0
C-terminus
sp_v1.2_unigene15715 SustainPine v1.2 680
AutoFact: RPA 70kDa subunit [Pisum sativum] 2.0e-27
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: protein 1.39375e-37
N-terminus
sp_v1.2_unigene27389 SustainPine v1.2 1949
AutoFact: RPA 70kDa subunit [Pisum sativum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: replication factor a1 0.0
Complete
sp_v1.2_unigene31500 SustainPine v1.2 815
AutoFact: DNA mismatch repair protein MLH1 [Arabidopsis thaliana] emb|CAA10163.1| MLH1 protein [Arabidopsis thaliana] emb|CAB78038.1| MLH1 protein [Arabidopsis thaliana] gb|AEE82726.1| DNA mismatch repair protein MLH1 [Arabidopsis thaliana] 0.0
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: predicted protein 0.0
Internal
sp_v1.2_unigene33057 SustainPine v1.2 1004
AutoFact: DNA mismatch repair protein MLH1 [Arabidopsis thaliana] emb|CAA10163.1| MLH1 protein [Arabidopsis thaliana] emb|CAB78038.1| MLH1 protein [Arabidopsis thaliana] gb|AEE82726.1| DNA mismatch repair protein MLH1 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: unnamed protein product 0.0
N-terminus
sp_v1.2_unigene33885 SustainPine v1.2 763
AutoFact: DNA mismatch repair protein MLH1 [Arabidopsis thaliana] emb|CAA10163.1| MLH1 protein [Arabidopsis thaliana] emb|CAB78038.1| MLH1 protein [Arabidopsis thaliana] gb|AEE82726.1| DNA mismatch repair protein MLH1 [Arabidopsis thaliana] 3.0e-36
FL-Next: tr=Putative uncharacterized protein Sb03g046470; Sorghum bicolor (Sorghum) (Sorghum vulgare). 0.0
Blast2go: hypothetical protein SORBIDRAFT_03g046470 5.74532e-44
C-terminus
sp_v1.2_unigene56535 SustainPine v1.2 339
AutoFact: Aprataxin, putative n=1 Tax=Ricinus communis RepID=B9SWY0_RICCO 5.0e-35
FL-Next: sp=Transcription factor bHLH140; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: basic helix-loop-helix family protein 4.2039e-44
Internal
sp_v1.2_unigene71566 SustainPine v1.2 425
AutoFact: replication factor A1 [Arabidopsis thaliana] gb|AAD25150.1| putative replication protein A1 [Arabidopsis thaliana] dbj|BAC43293.1| putative replication protein A1 [Arabidopsis thaliana] gb|AAO64881.1| At2g06510 [Arabidopsis thaliana] gb|AEC06010.1| replic 8.0e-20
FL-Next: tr=Putative uncharacterized protein; Selaginella moellendorffii (Spikemoss). 0.0
Blast2go: replication factor a 2.09474e-26
N-terminus
sp_v1.2_unigene80176 SustainPine v1.2 451
AutoFact: DNA mismatch repair protein MLH1 [Arabidopsis thaliana] emb|CAA10163.1| MLH1 protein [Arabidopsis thaliana] emb|CAB78038.1| MLH1 protein [Arabidopsis thaliana] gb|AEE82726.1| DNA mismatch repair protein MLH1 [Arabidopsis thaliana] 1.0e-17
FL-Next: tr=Putative uncharacterized protein; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: dna mismatch repair protein homolog 3.09884e-17
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain