Sustainpine_db
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Assembly Name: SustainPine v1.2

Name: cytoplasmic mRNA processing body

Term: GO:0000932  Help

Source: GO from Blast2go

Ontology: Cellular Component


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v1.2_unigene6356 SustainPine v1.2 1508
AutoFact: similar to yeast dcp1 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: mrna-decapping enzyme-like protein 0.0
Complete
sp_v1.2_unigene9928 SustainPine v1.2 1518
AutoFact: mRNA-decapping enzyme subunit 2 [Arabidopsis thaliana] dbj|BAC43684.1| unknown protein [Arabidopsis thaliana] gb|AAO63396.1| At5g13570 [Arabidopsis thaliana] gb|AED91912.1| mRNA-decapping enzyme subunit 2 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
sp_v1.2_unigene11163 SustainPine v1.2 1395
AutoFact: enhancer of mRNA-decapping protein 4 [Arabidopsis thaliana] gb|AEE75331.1| enhancer of mRNA-decapping protein 4 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: enhancer of mrna-decapping protein 4 0.0
C-terminus
sp_v1.2_unigene25051 SustainPine v1.2 1262
AutoFact: mRNA decapping enzyme 2; K12613 mRNA-decapping enzyme subunit 2 [EC:3.-.-.-] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
sp_v1.2_unigene25615 SustainPine v1.2 631
AutoFact: Os02g0722800 protein n=2 Tax=Oryza sativa RepID=Q6Z5M6_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein Sb04g029510; Sorghum bicolor (Sorghum) (Sorghum vulgare). 0.0
Blast2go: transducin wd-40 repeat 0.0
Internal
sp_v1.2_unigene32936 SustainPine v1.2 1052
AutoFact: WS0348.C21_I08 WS-SE-N-A-19 Picea glauca cDNA clone WS0348_I08 3, mRNA sequence. 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: unnamed protein product 0.0
Putative C-terminus
sp_v1.2_unigene33080 SustainPine v1.2 708
AutoFact: enhancer of mRNA-decapping protein 4 [Arabidopsis thaliana] gb|AEE75331.1| enhancer of mRNA-decapping protein 4 [Arabidopsis thaliana] 2.0e-16
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: unnamed protein product 8.98422e-21
C-terminus
sp_v1.2_unigene39279 SustainPine v1.2 814
AutoFact: similar to yeast dcp1 [Arabidopsis thaliana] 3.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: unknown 4.52197e-31
Internal
sp_v1.2_unigene45060 SustainPine v1.2 349
AutoFact: polypyrimidine track-binding protein homologue [Cicer arietinum] 2.0e-09
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: polypyrimidine tract-binding protein 3 6.10375e-32
Internal
sp_v1.2_unigene55107 SustainPine v1.2 507
AutoFact: Putative polypyrimidine track-binding protein n=1 Tax=Oryza sativa Japonica Group RepID=Q5TKN2_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: polypyrimidine tract-binding protein 3 0.0
C-terminus
sp_v1.2_unigene65741 SustainPine v1.2 599
AutoFact: Polypyrimidine tract-binding protein homolog 3 n=4 Tax=Arabidopsis RepID=PTBP3_ARATH 7.0e-34
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: polypyrimidine tract-binding protein 3 0.0
N-terminus
sp_v1.2_unigene66166 SustainPine v1.2 504
AutoFact: Polypyrimidine tract-binding protein homolog 3 n=4 Tax=Arabidopsis RepID=PTBP3_ARATH 2.0e-34
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: polypyrimidine tract-binding protein 3 0.0
N-terminus
sp_v1.2_unigene66855 SustainPine v1.2 479
AutoFact: mRNA decapping enzyme 1A, putative n=1 Tax=Ricinus communis RepID=B9SCX2_RICCO 7.0e-34
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: mrna decapping enzyme 3.1249e-42
Internal
sp_v1.2_unigene72013 SustainPine v1.2 811
AutoFact: polypyrimidine tract-binding protein 3 [Arabidopsis thaliana] ref|NP_001077672.1| polypyrimidine tract-binding protein 3 [Arabidopsis thaliana] sp|Q6ICX4.1|PTBP3_ARATH RecName: Full=Polypyrimidine tract-binding protein homolog 3 gb|AAT44975.1| At1g43190 [ 3.99931e-42
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: polypyrimidine tract-binding protein 3 0.0
N-terminus
sp_v1.2_unigene76292 SustainPine v1.2 388
AutoFact: polypyrimidine tract-binding protein 2 [Arabidopsis thaliana] sp|Q9FGL9.1|PTBP2_ARATH RecName: Full=Polypyrimidine tract-binding protein homolog 2 dbj|BAB08421.1| polypyrimidine tract-binding RNA transport protein-like [Arabidopsis thaliana] gb|AAU90050.1 5.0e-26
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: polypyrimidine tract binding 2.61135e-34
N-terminus
sp_v1.2_unigene83161 SustainPine v1.2 629
AutoFact: similar to yeast dcp1 [Arabidopsis thaliana] 1.0e-18
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: mrna decapping enzyme 1.08291e-30
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain