|
Sequence
|
Assembly
|
Length (nt)
|
|
Full-Length
|
|
sp_v1.2_unigene1863
|
SustainPine v1.2
|
864
|
|
• AutoFact: [K] COG5190 TFIIF-interacting CTD phosphatases, including NLI-interacting factor
|
2.0e-07
|
|
• FL-Next: sp=RNA polymerase II C-terminal domain phosphatase-like 3; Arabidopsis thaliana (Mouse-ear cress).
|
0.0
|
|
• Blast2go: protein
|
0.0
|
|
C-terminus
|
|
sp_v1.2_unigene2209
|
SustainPine v1.2
|
451
|
|
• AutoFact: Transcription Factor IIF, Rap30/Rap74, interaction [Medicago truncatula]
|
1.0e-18
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: protein
|
6.1997e-22
|
|
N-terminus
|
|
sp_v1.2_unigene4999
|
SustainPine v1.2
|
2759
|
|
• AutoFact: PREDICTED: similar to Polyadenylate-binding protein 4 (Poly(A)-binding protein 4) (PABP 4) (Inducible poly(A)-binding protein) (iPABP) (Activated-platelet protein-1) (APP-1) isoform 17 [Canis familiaris]
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: poly binding cytoplasmic 1
|
0.0
|
|
Complete
|
|
sp_v1.2_unigene12701
|
SustainPine v1.2
|
251
|
|
• AutoFact: PREDICTED: catenin (cadherin-associated protein), beta 1, 88kDa isoform 2 n=1 Tax=Pan troglodytes RepID=UPI0000E1FC25
|
4.0e-29
|
|
• Blast2go: catenin beta-1
|
6.74061e-29
|
|
Putative coding
|
|
sp_v1.2_unigene21200
|
SustainPine v1.2
|
695
|
|
• AutoFact: XRCC4 homolog [Populus nigra]
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: dna repair protein xrcc4
|
0.0
|
|
N-terminus
|
|
sp_v1.2_unigene22129
|
SustainPine v1.2
|
1214
|
|
• AutoFact: putative transcription initiation factor [Oryza sativa Japonica Group] gb|ABB46979.1| mutant TFIIF-alpha, putative, expressed [Oryza sativa Japonica Group]
|
1.0e-33
|
|
• FL-Next: Isoform 2 of Transcription initiation factor IIF subunit alpha OS=Arabidopsis thaliana GN=RAP74
|
0.0
|
|
• Blast2go: transcription initiation factor iif subunit alpha
|
2.8026e-45
|
|
C-terminus
|
|
sp_v1.2_unigene24563
|
SustainPine v1.2
|
629
|
|
• AutoFact: EARLY FLOWERING 3 n=1 Tax=Brassica rapa RepID=F5B4H0_BRACM
|
2.0e-11
|
|
• FL-Next: sp=Protein EARLY FLOWERING 3; Arabidopsis thaliana (Mouse-ear cress).
|
0.0
|
|
• Blast2go: early flowering 3
|
3.39045e-11
|
|
Internal
|
|
sp_v1.2_unigene24842
|
SustainPine v1.2
|
757
|
|
• AutoFact: RNA polymerase II C-terminal domain phosphatase-like 4 [Arabidopsis thaliana] sp|Q00IB6.1|CPL4_ARATH RecName: Full=RNA polymerase II C-terminal domain phosphatase-like 4; Short=FCP-like 4; AltName: Full=Carboxyl-terminal phosphatase-like 4; Short=AtCPL4;
|
9.0e-30
|
|
• FL-Next: sp=RNA polymerase II C-terminal domain phosphatase-like 4; Arabidopsis thaliana (Mouse-ear cress).
|
0.0
|
|
• Blast2go: protein
|
1.99419e-41
|
|
C-terminus
|
|
sp_v1.2_unigene38672
|
SustainPine v1.2
|
415
|
|
• AutoFact: PREDICTED: sirtuin 1-like n=1 Tax=Saccoglossus kowalevskii RepID=UPI0001CBC1AC
|
0.0
|
|
• FL-Next: tr=Similar to sirtuin; Ectocarpus siliculosus (Brown alga).
|
0.0
|
|
• Blast2go: PREDICTED: sirtuin 1-like
|
0.0
|
|
Internal
|
|
sp_v1.2_unigene38875
|
SustainPine v1.2
|
254
|
|
• AutoFact: Neuroblastoma RAS viral (V-ras) oncogene homolog (Fragment) n=2 Tax=Danio rerio RepID=B8JJT5_DANRE
|
5.0e-08
|
|
• FL-Next: tr=Ras; Rhodomonas sp. CCMP768.
|
0.0
|
|
• Blast2go: PREDICTED: GTPase NRas
|
3.07235e-15
|
|
N-terminus
|
|
sp_v1.2_unigene43239
|
SustainPine v1.2
|
514
|
|
• AutoFact: ultraviolet hypersensitive 1 [Arabidopsis thaliana]
|
0.0
|
|
• FL-Next: Isoform 2 of DNA repair endonuclease UVH1 OS=Arabidopsis thaliana GN=UVH1
|
0.0
|
|
• Blast2go: dna repair endonuclease uvh1
|
0.0
|
|
Internal
|
|
sp_v1.2_unigene45597
|
SustainPine v1.2
|
248
|
|
• AutoFact: PREDICTED: tyrosine-protein kinase ABL1 n=1 Tax=Monodelphis domestica RepID=UPI00020F590D
|
3.0e-28
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: mutant bcr abl fusion protein
|
1.42498e-37
|
|
Internal
|
|
sp_v1.2_unigene46380
|
SustainPine v1.2
|
235
|
|
• AutoFact: PREDICTED: GTPase HRas-like n=1 Tax=Anolis carolinensis RepID=UPI0002038098
|
1.0e-24
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: v-ha-ras harvey rat sarcoma viral oncogene-like protein
|
4.79571e-33
|
|
Internal
|
|
sp_v1.2_unigene49622
|
SustainPine v1.2
|
2484
|
|
• AutoFact: RNA polymerase II C-terminal domain phosphatase-like 4 [Arabidopsis thaliana] sp|Q00IB6.1|CPL4_ARATH RecName: Full=RNA polymerase II C-terminal domain phosphatase-like 4; Short=FCP-like 4; AltName: Full=Carboxyl-terminal phosphatase-like 4; Short=AtCPL4;
|
0.0
|
|
• FL-Next: sp=RNA polymerase II C-terminal domain phosphatase-like 4; Arabidopsis thaliana (Mouse-ear cress).
|
0.0
|
|
• Blast2go: protein
|
0.0
|
|
Complete
|
|
sp_v1.2_unigene55632
|
SustainPine v1.2
|
594
|
|
• AutoFact: Receptor tyrosine-protein kinase erbB-2 n=25 Tax=Eutheria RepID=ERBB2_HUMAN
|
3.0e-23
|
|
• FL-Next: sp=G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290; Arabidopsis thaliana (Mouse-ear cress).
|
0.0
|
|
• Blast2go: v-erb-b2 erythroblastic leukemia viral oncogene homolog neuro glioblastoma derived oncogene homolog isoform cra_b
|
7.52998e-29
|
|
Internal
|
|
sp_v1.2_unigene55711
|
SustainPine v1.2
|
587
|
|
• AutoFact: Transcription Factor IIF, Rap30/Rap74, interaction [Medicago truncatula]
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: protein
|
0.0
|
|
Putative N-terminus
|
|
sp_v1.2_unigene72316
|
SustainPine v1.2
|
522
|
|
• AutoFact: Tfiif-alpha, putative n=1 Tax=Ricinus communis RepID=B9S068_RICCO
|
1.0e-30
|
|
• FL-Next: Isoform 2 of Transcription initiation factor IIF subunit alpha OS=Arabidopsis thaliana GN=RAP74
|
0.0
|
|
• Blast2go: protein
|
1.50744e-35
|
|
Putative N-terminus
|
|
sp_v1.2_unigene76875
|
SustainPine v1.2
|
199
|
|
• AutoFact: [K] COG5190 TFIIF-interacting CTD phosphatases, including NLI-interacting factor
|
3.0e-05
|
|
• FL-Next: sp=RNA polymerase II C-terminal domain phosphatase-like 3; Arabidopsis thaliana (Mouse-ear cress).
|
0.0
|
|
• Blast2go: protein
|
1.14534e-27
|
|
Internal
|
|
sp_v1.2_unigene89528
|
SustainPine v1.2
|
491
|
|
• AutoFact: Predicted protein n=1 Tax=Physcomitrella patens subsp. patens RepID=A9TTN5_PHYPA
|
0.0
|
|
• FL-Next: sp=RNA polymerase II C-terminal domain phosphatase-like 4; Arabidopsis thaliana (Mouse-ear cress).
|
0.0
|
|
• Blast2go: protein
|
0.0
|
|
Internal
|
