Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v1.2

Name: condensed nuclear chromosome

Term: GO:0000794  Help

Source: GO from Blast2go

Ontology: Cellular Component


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v1.2_unigene1716 SustainPine v1.2 1594
AutoFact: cullin 1C [Nicotiana tabacum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: cullin 1 0.0
C-terminus
sp_v1.2_unigene27383 SustainPine v1.2 381
AutoFact: Auxin-resistance protein 6 (Fragment) n=2 Tax=Arabidopsis thaliana RepID=A5YXU7_ARATH 4.0e-39
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: auxin-resistance protein 6 3.53783e-40
Internal
sp_v1.2_unigene42102 SustainPine v1.2 518
AutoFact: endonuclease [Arabidopsis thaliana] 1.0e-15
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: crossover junction endonuclease mus81 2.42852e-19
Internal
sp_v1.2_unigene51182 SustainPine v1.2 378
AutoFact: Similarity to mismatch repair protein MutS n=1 Tax=Arabidopsis thaliana RepID=Q9LTP4_ARATH 2.0e-33
FL-Next: tr=At3g20475; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: dna mismatch repair protein 1.43682e-40
Putative N-terminus
sp_v1.2_unigene58486 SustainPine v1.2 492
AutoFact: MutS-like protein 5 [Arabidopsis thaliana] 3.0e-13
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: dna mismatch repair protein 2.3857e-20
C-terminus

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain