Sustainpine_db
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Assembly Name: SustainPine v1.2

Name: protein binding

Term: GO:0005515  Help

Source: GO from Blast2go

Ontology: Molecular Function


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v1.2_unigene3335 SustainPine v1.2 1893
AutoFact: PREDICTED: HIV-1 Vpr binding protein, partial [Bos taurus] 9.80909e-45
FL-Next: sp=DDB1- and CUL4-associated factor homolog 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 0.0
C-terminus
sp_v1.2_unigene3357 SustainPine v1.2 1330
AutoFact: phosphatidylinositol-4-phosphate 5-kinase 9 [Arabidopsis thaliana] ref|NP_001030666.1| phosphatidylinositol-4-phosphate 5-kinase 9 [Arabidopsis thaliana] ref|NP_001189852.1| phosphatidylinositol-4-phosphate 5-kinase 9 [Arabidopsis thaliana] sp|Q8L850.2|PI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: phosphatidylinositol-4-phosphate 5-kinase 9 0.0
C-terminus
sp_v1.2_unigene3412 SustainPine v1.2 3658
AutoFact: tRNA-binding arm; t-snare [Medicago truncatula] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: golgin candidate 5 0.0
Complete
sp_v1.2_unigene3472 SustainPine v1.2 963
AutoFact: WS02718.B21_L19 SS-IL-A-FL-14 Picea sitchensis cDNA clone WS02718_L19 5, mRNA sequence. 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: dual specificity protein phosphatase family protein 0.0
Putative N-terminus
sp_v1.2_unigene3473 SustainPine v1.2 2074
AutoFact: ROOT HAIRLESS 1 [Arabidopsis thaliana] 0.0
FL-Next: sp=DNA-binding protein RHL1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: root hairless 1 0.0
Complete
sp_v1.2_unigene3476 SustainPine v1.2 808
AutoFact: Chaperone protein dnaJ, putative n=1 Tax=Ricinus communis RepID=B9SSF5_RICCO 0.0
FL-Next: sp=Chaperone protein dnaJ 13; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 0.0
Internal
sp_v1.2_unigene3496 SustainPine v1.2 560
AutoFact: L-type lectin-domain containing receptor kinase IV.3 n=2 Tax=Arabidopsis RepID=LRK43_ARATH 2.0e-11
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: concanavalin a-like lectin kinase-like protein 4.08193e-16
Putative C-terminus
sp_v1.2_unigene3545 SustainPine v1.2 2079
AutoFact: WD40 domain-containing protein [Arabidopsis thaliana] gb|AAU94425.1| At1g65030 [Arabidopsis thaliana] gb|AEE34317.1| WD40 domain-containing protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pak inhibitor 0.0
Complete
sp_v1.2_unigene3571 SustainPine v1.2 1914
AutoFact: Double-stranded RNA binding protein (Fragment) n=1 Tax=Physcomitrella patens subsp. patens RepID=A9TW99_PHYPA 1.0e-24
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dsrna-binding protein 5.5781e-26
Putative Complete
sp_v1.2_unigene3619 SustainPine v1.2 986
AutoFact: Preprotein translocase subunit secY, chloroplastic n=2 Tax=Arabidopsis RepID=SECY_ARATH 0.0
FL-Next: sp=Preprotein translocase subunit secY, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: preprotein translocase subunit secy 0.0
N-terminus
sp_v1.2_unigene3663 SustainPine v1.2 1933
AutoFact: Cytochrome P450, putative n=1 Tax=Ricinus communis RepID=B9SEM0_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: cytochrome p450 0.0
Complete
sp_v1.2_unigene3768 SustainPine v1.2 1605
AutoFact: SWI/SNF complex subunit SWI3C [Arabidopsis thaliana] sp|Q9XI07.1|SWI3C_ARATH RecName: Full=SWI/SNF complex subunit SWI3C; Short=AtSWI3C; AltName: Full=Transcription regulatory protein SWI3C gb|AAD41423.1|AC007727_12 Contains similarity to gb|AF033823 moir 0.0
FL-Next: sp=SWI/SNF complex subunit SWI3C; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: chromatin remodeling complex subunit 0.0
Putative C-terminus
sp_v1.2_unigene3769 SustainPine v1.2 2482
AutoFact: Carboxy-terminal binding protein n=1 Tax=Larix gmelinii RepID=B3XZL7_9CONI 0.0
FL-Next: tr=Carboxy-terminal binding protein; Larix gmelinii. 0.0
Blast2go: c-terminal binding protein 0.0
Complete
sp_v1.2_unigene3789 SustainPine v1.2 807
AutoFact: bHLH protein [Arabidopsis thaliana] 2.0e-39
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: transcription factor egl1 0.0
Putative Complete
sp_v1.2_unigene3817 SustainPine v1.2 719
AutoFact: similar to dynamin-like protein encoded by GenBank Accession Number X99669 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Internal
sp_v1.2_unigene3823 SustainPine v1.2 1211
AutoFact: kinesin 1 [Arabidopsis thaliana] sp|Q07970.1|ATK1_ARATH RecName: Full=Kinesin-1; AltName: Full=Kinesin-like protein A dbj|BAA01972.1| kinesin-like motor protein heavy chain [Arabidopsis thaliana] emb|CAA17546.1| kinesin-related protein katA [Arabidopsis t 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: kinesin-related protein klpa-like protein 0.0
Putative N-terminus
sp_v1.2_unigene3825 SustainPine v1.2 2104
AutoFact: Histone deacetylase n=2 Tax=Physcomitrella patens subsp. patens RepID=A9TG19_PHYPA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone deacetylase 0.0
Complete
sp_v1.2_unigene3894 SustainPine v1.2 1627
AutoFact: Ninja-family protein AFP3 [Arabidopsis thaliana] ref|NP_001030794.1| Ninja-family protein AFP3 [Arabidopsis thaliana] ref|NP_001078222.1| Ninja-family protein AFP3 [Arabidopsis thaliana] sp|Q94F39.1|AFP3_ARATH RecName: Full=Ninja-family protein AFP3; AltN 3.0e-21
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ninja-family protein afp3 4.26652e-24
Complete
sp_v1.2_unigene3921 SustainPine v1.2 1470
AutoFact: GroES-like zinc-binding alcohol dehydrogenase-like protein [Arabidopsis thaliana] emb|CAB88049.1| quinone reductase-like protein [Arabidopsis thaliana] gb|AAN41337.1| putative quinone reductase [Arabidopsis thaliana] dbj|BAD94498.1| quinone reductase-like 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
sp_v1.2_unigene4019 SustainPine v1.2 598
AutoFact: Cyclin-dependent kinase B1-1 n=2 Tax=Oryza sativa RepID=CKB11_ORYSJ 8.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 1.39145e-18
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain