Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v1.2

Name: cytoplasm

Term: GO:0005737  Help

Source: GO from Blast2go

Ontology: Cellular Component


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v1.2_unigene4 SustainPine v1.2 476
AutoFact: Aberrant root formation protein 4 n=3 Tax=Arabidopsis thaliana RepID=ALF4_ARATH 4.0e-13
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: aberrant root formation protein 4 0.0
Internal
sp_v1.2_unigene25 SustainPine v1.2 331
AutoFact: histone deacetylase 5 [Arabidopsis thaliana] sp|Q8RX28.1|HDA5_ARATH RecName: Full=Histone deacetylase 5 gb|AAM13986.1| putative histone deacetylase [Arabidopsis thaliana] gb|AAM53342.1| histone deacetylase-like protein [Arabidopsis thaliana] gb|AAN15392.1 1.0e-08
FL-Next: sp=Histone deacetylase 5; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: histone deacetylase 5 1.74598e-08
Putative N-terminus
sp_v1.2_unigene32 SustainPine v1.2 1116
AutoFact: Nuclear transport factor 2 n=5 Tax=Brassicaceae RepID=NTF2_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: nuclear transport factor 2 0.0
Complete
sp_v1.2_unigene222 SustainPine v1.2 792
AutoFact: Calcium dependent protein kinase 25 n=3 Tax=Malpighiales RepID=B9HNH4_POPTR 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: calcium-dependent protein kinase 17 0.0
N-terminus
sp_v1.2_unigene259 SustainPine v1.2 737
AutoFact: Nucleosome assembly protein family n=1 Tax=Physcomitrella patens subsp. patens RepID=A9RDK1_PHYPA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: nucleosome chromatin assembly factor group 0.0
N-terminus
sp_v1.2_unigene284 SustainPine v1.2 2994
AutoFact: contains similarity to human PCF11p homolog (GB:AF046935) [Arabidopsis thaliana] 0.0
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: protein 0.0
Putative C-terminus
sp_v1.2_unigene407 SustainPine v1.2 632
AutoFact: putative peroxidase [Cinnamomum micranthum f. kanehirae] 8.0e-24
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: peroxidase 27 7.37578e-24
N-terminus
sp_v1.2_unigene633 SustainPine v1.2 1545
AutoFact: Histidine-containing phosphotransfer protein n=1 Tax=Catharanthus roseus RepID=Q94KS0_CATRO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histidine-containing phosphotransfer 0.0
Complete
sp_v1.2_unigene748 SustainPine v1.2 1045
AutoFact: eukaryotic translation initiation factor 2c, putative 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: argonaute protein group 0.0
Complete
sp_v1.2_unigene773 SustainPine v1.2 1612
AutoFact: Indole-3-acetic acid-amido synthetase GH3.17, putative n=1 Tax=Ricinus communis RepID=B9RG18_RICCO 0.0
FL-Next: tr=Auxin-induced GH3 protein; Pinus pinaster (Maritime pine). 0.0
Blast2go: indole-3-acetic acid-amido synthetase 0.0
C-terminus
sp_v1.2_unigene835 SustainPine v1.2 1599
AutoFact: Pectinesterase (Fragment) n=2 Tax=Vitis vinifera RepID=D7SP30_VITVI 0.0
FL-Next: sp=Pectinesterase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
sp_v1.2_unigene1009 SustainPine v1.2 744
AutoFact: DNA repair protein RAD50, putative n=1 Tax=Ricinus communis RepID=B9S9Y8_RICCO 0.0
FL-Next: sp=DNA repair protein RAD50; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: dna repair protein rad50 0.0
N-terminus
sp_v1.2_unigene1050 SustainPine v1.2 1673
AutoFact: RNA polymerase, dimerisation [Medicago truncatula] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna-directed rna polymerase third largest subunit 0.0
Complete
sp_v1.2_unigene1059 SustainPine v1.2 2035
AutoFact: DEAD-box ATP-dependent RNA helicase 38 [Arabidopsis thaliana] sp|Q93ZG7.2|RH38_ARATH RecName: Full=DEAD-box ATP-dependent RNA helicase 38; AltName: Full=Low expression of osmotically-responsive genes 4 protein; AltName: Full=Protein CRYOPHYTE emb|CAB64214 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna helicase-like protein 0.0
Complete
sp_v1.2_unigene1247 SustainPine v1.2 1714
AutoFact: Serine/threonine-protein phosphatase n=2 Tax=Embryophyta RepID=A9TZL9_PHYPA 0.0
FL-Next: sp=Serine/threonine-protein phosphatase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
sp_v1.2_unigene1482 SustainPine v1.2 1331
AutoFact: Ubiquitin carrier protein n=1 Tax=Picea sitchensis RepID=D5A9Q7_PICSI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ubiquitin-conjugating enzyme e2 0.0
Complete
sp_v1.2_unigene1486 SustainPine v1.2 1055
AutoFact: Polcalcin Jun o, putative n=1 Tax=Ricinus communis RepID=B9SJ25_RICCO 2.0e-33
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: polcalcin 2.22473e-35
Complete
sp_v1.2_unigene1623 SustainPine v1.2 1862
AutoFact: flag-tagged protein kinase domain of putative mitogen-activated protein kinase kinase kinase [synthetic construct] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: integrin-linked protein kinase family protein 0.0
C-terminus
sp_v1.2_unigene1684 SustainPine v1.2 1448
AutoFact: Type A response regulator RR1 n=1 Tax=Phaseolus vulgaris RepID=B0YGG5_PHAVU 4.0e-38
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: type a response regulator 0.0
Complete
sp_v1.2_unigene2087 SustainPine v1.2 615
AutoFact: putative MAP4 kinase [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: map 4 kinase alpha1 0.0
Internal

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain