Sustainpine_db
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Assembly Name: SustainPine v1.2

Name: nucleus

Term: GO:0005634  Help

Source: GO from Blast2go

Ontology: Cellular Component


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v1.2_unigene4 SustainPine v1.2 476
AutoFact: Aberrant root formation protein 4 n=3 Tax=Arabidopsis thaliana RepID=ALF4_ARATH 4.0e-13
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: aberrant root formation protein 4 0.0
Internal
sp_v1.2_unigene25 SustainPine v1.2 331
AutoFact: histone deacetylase 5 [Arabidopsis thaliana] sp|Q8RX28.1|HDA5_ARATH RecName: Full=Histone deacetylase 5 gb|AAM13986.1| putative histone deacetylase [Arabidopsis thaliana] gb|AAM53342.1| histone deacetylase-like protein [Arabidopsis thaliana] gb|AAN15392.1 1.0e-08
FL-Next: sp=Histone deacetylase 5; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: histone deacetylase 5 1.74598e-08
Putative N-terminus
sp_v1.2_unigene49 SustainPine v1.2 2026
AutoFact: U2 snrnp auxiliary factor, small subunit, putative n=1 Tax=Ricinus communis RepID=B9SRG2_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: u2 snrnp auxiliary small 0.0
Complete
sp_v1.2_unigene60 SustainPine v1.2 1763
AutoFact: Transcriptional corepressor LEUNIG n=1 Tax=Arabidopsis thaliana RepID=F4JUD2_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: transcriptional corepressor leunig 0.0
Putative Complete
sp_v1.2_unigene67 SustainPine v1.2 1317
AutoFact: sister chromatid cohesion protein PDS5 [Arabidopsis thaliana] gb|AED95551.1| sister chromatid cohesion protein PDS5 [Arabidopsis thaliana] 1.0e-16
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: sister chromatid cohesion protein pds5 4.0682e-19
Putative N-terminus
sp_v1.2_unigene125 SustainPine v1.2 1982
AutoFact: F-box/LRR-repeat protein 5 [Arabidopsis thaliana] ref|NP_001185415.1| F-box/LRR-repeat protein 5 [Arabidopsis thaliana] sp|O49286.1|SKP2B_ARATH RecName: Full=F-box protein SKP2B; AltName: Full=F-box/LRR-repeat protein 5; Short=AtFB5; AltName: Full=SKP2-li 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: f-box protein fbl2 0.0
Complete
sp_v1.2_unigene142 SustainPine v1.2 836
AutoFact: Rab family protein 3.0e-13
FL-Next: sp=Uncharacterized GTP-binding protein At5g64813; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: gtp-binding protein 2.41994e-17
C-terminus
sp_v1.2_unigene172 SustainPine v1.2 573
AutoFact: YTH domain containing protein 2.0e-20
FL-Next: sp=Cleavage and polyadenylation specificity factor CPSF30; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 0.0
Internal
sp_v1.2_unigene176 SustainPine v1.2 3171
AutoFact: YDG_SRA multi-domain protein 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
sp_v1.2_unigene225 SustainPine v1.2 723
AutoFact: G patch domain-containing protein 1 [Arabidopsis thaliana] dbj|BAC42755.1| unknown protein [Arabidopsis thaliana] gb|AAP40415.1| unknown protein [Arabidopsis thaliana] gb|AED93116.1| G patch domain-containing protein 1 [Arabidopsis thaliana] 3.0e-33
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: g patch domain-containing protein 1 7.66437e-40
Internal
sp_v1.2_unigene259 SustainPine v1.2 737
AutoFact: Nucleosome assembly protein family n=1 Tax=Physcomitrella patens subsp. patens RepID=A9RDK1_PHYPA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: nucleosome chromatin assembly factor group 0.0
N-terminus
sp_v1.2_unigene283 SustainPine v1.2 1185
AutoFact: Probable inorganic phosphate transporter 1-8 n=3 Tax=Oryza sativa RepID=PHT18_ORYSJ 0.0
FL-Next: tr=Putative phosphate transporter; Cryptomeria japonica (Japanese cedar) (Cupressus japonica). 0.0
Blast2go: phosphate transporter 0.0
C-terminus
sp_v1.2_unigene284 SustainPine v1.2 2994
AutoFact: contains similarity to human PCF11p homolog (GB:AF046935) [Arabidopsis thaliana] 0.0
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: protein 0.0
Putative C-terminus
sp_v1.2_unigene297 SustainPine v1.2 1261
AutoFact: [R] COG2319 FOG: WD40 repeat 8.0e-09
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein topless 0.0
Putative Complete
sp_v1.2_unigene368 SustainPine v1.2 2096
AutoFact: nucleoporin 50 protein [Arabidopsis thaliana] gb|AAG51549.1|AC037424_14 unknown protein; 23094-21772 [Arabidopsis thaliana] gb|AAK59765.1| At1g52380/F19K6_4 [Arabidopsis thaliana] gb|AAL15374.1| At1g52380/F19K6_4 [Arabidopsis thaliana] gb|AEE32797.1| nucl 7.0e-36
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ran-binding protein 1 domain-containing protein 0.0
Complete
sp_v1.2_unigene369 SustainPine v1.2 1046
AutoFact: Chaperone protein dnaJ 11, chloroplast, putative n=1 Tax=Ricinus communis RepID=B9S6N6_RICCO 3.0e-22
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: chaperone protein dnaj chloroplast 0.0
Complete
sp_v1.2_unigene382 SustainPine v1.2 767
AutoFact: Class III homeodomain-leucine zipper n=2 Tax=Psilotum nudum RepID=Q1WD31_PSINU 9.0e-24
FL-Next: tr=Class III homeodomain-leucine zipper; Pseudotsuga menziesii (Douglas-fir) (Abies menziesii). 0.0
Blast2go: dna binding 1.01617e-24
N-terminus
sp_v1.2_unigene393 SustainPine v1.2 917
AutoFact: Unassigned protein
FL-Next: sp=RNA polymerase II C-terminal domain phosphatase-like 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 0.0
Internal
sp_v1.2_unigene407 SustainPine v1.2 632
AutoFact: putative peroxidase [Cinnamomum micranthum f. kanehirae] 8.0e-24
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: peroxidase 27 7.37578e-24
N-terminus
sp_v1.2_unigene408 SustainPine v1.2 634
AutoFact: BTB domain containing protein 1.0e-06
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 9.73556e-32
Putative C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain