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Assembly Name: Hypothalamus f-wt v1.0

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Help Complete | Putative Complete | N-terminus | Putative N-terminus | Internal | C-terminus | Putative C-terminus | Coding | Putative Coding | Putative ncRNA | Misassembled | Unknown


Search: Containing in

Name Length
SoftwareDescriptionE-value
FL-next Status Origin of reads
hpt_f_wt_v1.0_unigene364 593
• AutoFact
Peroxiredoxin-1 n=4 Tax=Percomorpha RepID=C3KHC7_ANOFI
0.0
• FL-Next
tr=Natural killer enhancing factor; Paralichthys olivaceus (Japanese flounder) (Hippoglossus olivaceus).
0.0
• Sma3
Natural killer enhancing factor
0.0
N-terminus
hpt_f_wt_v1.0_unigene368 213
• AutoFact
PREDICTED: potential tRNA (adenine-N(1)-)-methyltransferase catalytic subunit TRMT61B-like n=1 Tax=Danio rerio RepID=UPI0000F202A1
1.0e-05
• FL-Next
None-
• Sma3
None-
unknown
hpt_f_wt_v1.0_unigene370 454
• AutoFact
secretagogin n=1 Tax=Salmo salar RepID=B5X2B6_SALSA
0.0
• FL-Next
tr=secretagogin; Salmo salar (Atlantic salmon).
0.0
• Sma3
secretagogin
4.549e-22
Internal
hpt_f_wt_v1.0_unigene373 205
• AutoFact
similar to c-MYC promoter-binding protein IRLB
1.0e-15
• FL-Next
tr=Chromosome undetermined SCAF15099, whole genome shotgun sequence; Tetraodon nigroviridis (Green puffer).
0.0
• Sma3
Dennd4a protein
8.681e-06
C-terminus
hpt_f_wt_v1.0_unigene374 121
• AutoFact
helt, zgc:109704; hey-like transcription factor
2.0e-10
• FL-Next
tr=hey-like transcription factor; Danio rerio (Zebrafish) (Brachydanio rerio).
0.0
• Sma3
hey-like transcription factor
6.665e-06
Internal
hpt_f_wt_v1.0_unigene376 644
• AutoFact
COMM domain-containing protein 6 n=1 Tax=Osmerus mordax RepID=C1BKT3_OSMMO
0.0
• FL-Next
tr=COMM domain-containing protein 6; Osmerus mordax (Rainbow smelt) (Atherina mordax).
0.0
• Sma3
Uncharacterized protein
0.0
C-terminus
hpt_f_wt_v1.0_unigene377 311
• AutoFact
ciapin1, wu:fc46b12, zgc:92009; cytokine induced apoptosis inhibitor 1
1.0e-16
• FL-Next
sp=Anamorsin; Tetraodon nigroviridis (Green puffer).
0.0
• Sma3
Anamorsin
8.195e-33
Internal
hpt_f_wt_v1.0_unigene380 327
• AutoFact
trna 2'-phosphotransferase 1 n=1 Tax=Danio rerio RepID=TRPT1_DANRE
6.0e-30
• FL-Next
tr=Chromosome undetermined SCAF7739, whole genome shotgun sequence; Tetraodon nigroviridis (Green puffer).
0.0
• Sma3
trna phosphotransferase 1
6.045e-06
C-terminus
hpt_f_wt_v1.0_unigene383 163
• AutoFact
Unassigned protein
0.0
• FL-Next
tr=Alpha B crystallin; Dissostichus mawsoni (Antarctic cod).
0.0
• Sma3
Alpha B crystallin
2.17e-06
N-terminus
hpt_f_wt_v1.0_unigene384 322
• AutoFact
atrx, MGC66223, atrxl, wu:fb26e12, wu:fb52h08, wu:fb94e07, zgc:66223; alpha thalassemia/mental retardation syndrome X-linked homolog (human); K10779 transcriptional regulator ATRX [EC:3.6.1.-]
0.0
• FL-Next
tr=Uncharacterized protein; Danio rerio (Zebrafish) (Brachydanio rerio).
0.0
• Sma3
alpha thalassemia/mental retardation syndrome X-linked homolog (human)
9.783e-10
Internal
hpt_f_wt_v1.0_unigene385 387
• AutoFact
htatip2, fb15b04, tip30, wu:fb15b04; HIV-1 tat interactive protein 2
0.0
• FL-Next
tr=HIV-1 tat interactive protein 2; Danio rerio (Zebrafish) (Brachydanio rerio).
0.0
• Sma3
tat-interacting protein tip30
9.301e-06
Internal
hpt_f_wt_v1.0_unigene387 227
• AutoFact
mrrf, zgc:91914; mitochondrial ribosome recycling factor; K02838 ribosome recycling factor
9.0e-12
• FL-Next
tr=ribosome recycling factor, mitochondrial; Salmo salar (Atlantic salmon).
0.0
• Sma3
ribosome recycling factor, mitochondrial
5.195e-11
C-terminus
hpt_f_wt_v1.0_unigene388 265
• AutoFact
nasal embryonic lhrh factor-like
2.0e-20
• FL-Next
tr=Uncharacterized protein; Danio rerio (Zebrafish) (Brachydanio rerio).
0.0
• Sma3
nasal embryonic lhrh factor a
3.561e-11
Internal
hpt_f_wt_v1.0_unigene389 274
• AutoFact
PREDICTED: f-box only protein 48-like isoform 1 [Danio rerio] ref|XP_003197774.1| PREDICTED: f-box only protein 48-like isoform 3 [Danio rerio]
4.0e-05
• FL-Next
tr=Chromosome undetermined scaf10022, whole genome shotgun sequence; Tetraodon nigroviridis (Green puffer).
0.0
• Sma3
Chromosome undetermined scaf10022, whole genome shotgun sequence
6.82e-06
N-terminus
hpt_f_wt_v1.0_unigene390 331
• AutoFact
dynactin subunit 6 n=2 Tax=Percomorpha RepID=C3KHS9_ANOFI
8.40779e-45
• FL-Next
tr=dynactin subunit 6; Anoplopoma fimbria (Sablefish).
0.0
• Sma3
dynactin subunit 6
2.521e-28
N-terminus
hpt_f_wt_v1.0_unigene391 453
• AutoFact
ppwd1, zgc:165355; peptidylprolyl isomerase domain and WD repeat containing 1 (EC:5.2.1.8); K12736 peptidylprolyl isomerase domain and WD repeat-containing protein 1 [EC:5.2.1.8]
0.0
• FL-Next
tr=Chromosome undetermined SCAF14764, whole genome shotgun sequence; Tetraodon nigroviridis (Green puffer).
0.0
• Sma3
peptidylprolyl isomerase domain and WD repeat containing 1
2.146e-09
Internal
hpt_f_wt_v1.0_unigene392 188
• AutoFact
SLC10A1, MGC128766; solute carrier family 10 (sodium/bile acid cotransporter family), member 1
3.0e-08
• FL-Next
tr=Uncharacterized protein; Danio rerio (Zebrafish) (Brachydanio rerio).
0.0
• Sma3
None-
Putative C-terminus
hpt_f_wt_v1.0_unigene394 272
• AutoFact
MGC158544, eif4e2, id:ibd1007, zgc:158544; zgc:110542; K03259 translation initiation factor eIF-4E
0.0001
• FL-Next
None-
• Sma3
None-
unknown
hpt_f_wt_v1.0_unigene397 210
• AutoFact
Novel protein similar to vertebrate nadh dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 1 (ndufaf1, zgc:113197) n=2 Tax=Danio rerio RepID=Q5CZW0_DANRE
7.0e-28
• FL-Next
tr=Novel protein similar to vertebrate nadh dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 1 (ndufaf1, zgc:113197); Danio rerio (Zebrafish) (Brachydanio rerio).
0.0
• Sma3
nadh dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 1
8.506e-11
Internal
hpt_f_wt_v1.0_unigene400 288
• AutoFact
Unassigned protein
2.0e-10
• FL-Next
tr=Chromosome undetermined SCAF15048, whole genome shotgun sequence; Tetraodon nigroviridis (Green puffer).
0.0
• Sma3
None-
Complete


Juntadeandalucia

IFAPA Centro El Toruño. Ctra. N. IV Km. 654a. Camino de Tiro Pichón. El Puerto de Santa María (Cádiz), Spain.
Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29590 Campanillas (Málaga), Spain