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Assembly Name: Hypothalamus f-wt v1.0

Listing Annotated UniGenes

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Help Complete | Putative Complete | N-terminus | Putative N-terminus | Internal | C-terminus | Putative C-terminus | Coding | Putative Coding | Putative ncRNA | Misassembled | Unknown


Search: Containing in

Name Length
SoftwareDescriptionE-value
FL-next Status Origin of reads
hpt_f_wt_v1.0_unigene301 320
• AutoFact
mlc1, si:ch211-192n14.1; megalencephalic leukoencephalopathy with subcortical cysts 1
7.0e-09
• FL-Next
tr=Mlc1 protein; Danio rerio (Zebrafish) (Brachydanio rerio).
0.0
• Sma3
None-
C-terminus
hpt_f_wt_v1.0_unigene302 198
• AutoFact
Unassigned protein
0.0
• FL-Next
tr=Lipocalin; Salmo salar (Atlantic salmon).
0.0
• Sma3
Lipocalin
2.912e-09
N-terminus
hpt_f_wt_v1.0_unigene307 254
• AutoFact
vesicle transport protein sec20 n=1 Tax=Oncorhynchus mykiss RepID=C1BI84_ONCMY
9.0e-10
• FL-Next
tr=Chromosome 1 SCAF15015, whole genome shotgun sequence; Tetraodon nigroviridis (Green puffer).
0.0
• Sma3
vesicle transport protein sec20
1.442e-11
Internal
hpt_f_wt_v1.0_unigene311 219
• AutoFact
Sec14l1 protein n=4 Tax=Xenopus RepID=Q66KK9_XENTR
7.0e-26
• FL-Next
tr=SEC14-like 1 (S. cerevisiae); Danio rerio (Zebrafish) (Brachydanio rerio).
0.0
• Sma3
None-
Internal
hpt_f_wt_v1.0_unigene315 186
• AutoFact
CD20 domain containing protein
2.0e-06
• FL-Next
None-
• Sma3
None-
unknown
hpt_f_wt_v1.0_unigene319 269
• AutoFact
cytochrome c oxidase assembly protein cox19 n=2 Tax=Euteleostei RepID=B9ENB0_SALSA
2.0e-23
• FL-Next
tr=cytochrome c oxidase assembly protein cox19; Salmo salar (Atlantic salmon).
0.0
• Sma3
cytochrome c oxidase assembly protein cox19
4.654e-16
N-terminus
hpt_f_wt_v1.0_unigene322 350
• AutoFact
kelch-like 13-like; K10451 kelch-like protein 14
0.0
• FL-Next
tr=Uncharacterized protein; Danio rerio (Zebrafish) (Brachydanio rerio).
0.0
• Sma3
kelch-like 14
6.82e-06
Internal
hpt_f_wt_v1.0_unigene330 304
• AutoFact
Charged multivesicular body protein 7 n=2 Tax=Danio rerio RepID=CHMP7_DANRE
1.0e-30
• FL-Next
tr=CHMP family, member 7; Danio rerio (Zebrafish) (Brachydanio rerio).
0.0
• Sma3
CHMP7
4.65e-06
Internal
hpt_f_wt_v1.0_unigene335 311
• AutoFact
similar to pentatricopeptide repeat domain 2
8.0e-32
• FL-Next
sp=pentatricopeptide repeat-containing protein 2; Danio rerio (Zebrafish) (Brachydanio rerio).
0.0
• Sma3
pentatricopeptide repeat-containing protein 2
3.748e-11
Internal
hpt_f_wt_v1.0_unigene337 290
• AutoFact
atp6v0b, wu:fb33a01, zgc:63832; ATPase, H+ transporting, V0 subunit B; K03661 V-type H+-transporting ATPase 21kDa proteolipid subunit [EC:3.6.3.14]
3.0e-07
• FL-Next
tr=Vacuolar ATP synthase 21 kDa proteolipid subunit; Anoplopoma fimbria (Sablefish).
0.0
• Sma3
Chromosome 15 SCAF14934, whole genome shotgun sequence
5.27e-06
N-terminus
hpt_f_wt_v1.0_unigene339 322
• AutoFact
mitochondrial import receptor subunit tom20 homolog B n=3 Tax=Otophysi RepID=TM20B_DANRE
1.0e-39
• FL-Next
tr=mitochondrial import receptor subunit tom20 homolog; Osmerus mordax (Rainbow smelt) (Atherina mordax).
0.0
• Sma3
mitochondrial import receptor subunit tom20 homolog
1.007e-25
Putative C-terminus
hpt_f_wt_v1.0_unigene340 300
• AutoFact
basic transcription factor 3-like; K01527 nascent polypeptide-associated complex subunit beta
2.0e-26
• FL-Next
tr=Basic transcription factor 3 type II; Perca flavescens (Yellow perch) (Morone flavescens).
0.0
• Sma3
RNA polymerase B transcription factor 3
7.75e-06
C-terminus
hpt_f_wt_v1.0_unigene342 297
• AutoFact
MGC85889; zgc:85889
0.0
• FL-Next
tr=Uncharacterized protein; Danio rerio (Zebrafish) (Brachydanio rerio).
0.0
• Sma3
Nptx2 protein
9.286e-10
Internal
hpt_f_wt_v1.0_unigene343 319
• AutoFact
hsp90ab1, MGC69447, d6s182, hsp90-beta, hsp90b, hsp90beta, hspc2, hspcb; heat shock protein 90kDa alpha (cytosolic), class B member 1; K04079 molecular chaperone HtpG
0.0
• FL-Next
tr=Cytosolic heat shock protein 90 beta; Solea senegalensis (Senegalese sole).
0.0
• Sma3
heat shock protein 90 alpha
9.886e-16
Internal
hpt_f_wt_v1.0_unigene344 217
• AutoFact
peptidyl-prolyl cis-trans isomerase n=4 Tax=Clupeocephala RepID=Q6IQL3_DANRE
4.0e-24
• FL-Next
sp=peptidyl-prolyl cis-trans isomerase; Salmo salar (Atlantic salmon).
0.0
• Sma3
peptidyl-prolyl cis-trans isomerase
5.009e-27
N-terminus
hpt_f_wt_v1.0_unigene346 230
• AutoFact
None-
• FL-Next
None-
• Sma3
None-
unknown
hpt_f_wt_v1.0_unigene349 188
• AutoFact
Adrenomedullin 1 n=1 Tax=Oryzias latipes RepID=Q05K92_ORYLA
2.0e-05
• FL-Next
tr=Adrenomedullin 1; Oryzias latipes (Medaka fish) (Japanese ricefish).
0.0
• Sma3
None-
C-terminus
hpt_f_wt_v1.0_unigene351 301
• AutoFact
Transcription initiation factor iia subunit 2 n=5 Tax=Euteleostei RepID=T2AG_PAROL
5.0e-27
• FL-Next
sp=Transcription initiation factor iia subunit 2; Esox lucius (Northern pike).
0.0
• Sma3
None-
N-terminus
hpt_f_wt_v1.0_unigene354 491
• AutoFact
ptk6b, MGC153964, zgc:153964; PTK6 protein tyrosine kinase 6b; K08894 PTK6 protein tyrosine kinase 6 [EC:2.7.10.2]
0.0
• FL-Next
tr=Uncharacterized protein; Danio rerio (Zebrafish) (Brachydanio rerio).
0.0
• Sma3
V-yes-1 Yamaguchi sarcoma viral related oncogene homolog
5.753e-14
C-terminus
hpt_f_wt_v1.0_unigene362 280
• AutoFact
PREDICTED: similar to vacuolar proton-ATPase E-subunit n=1 Tax=Ornithorhynchus anatinus RepID=UPI000155BDF6
5.0e-13
• FL-Next
tr=vacuolar ATP synthase subunit E; Danio rerio (Zebrafish) (Brachydanio rerio).
0.0
• Sma3
vacuolar proton pump subunit E 1
1.319e-09
N-terminus


Juntadeandalucia

IFAPA Centro El Toruño. Ctra. N. IV Km. 654a. Camino de Tiro Pichón. El Puerto de Santa María (Cádiz), Spain.
Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29590 Campanillas (Málaga), Spain