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Assembly Name: Hypothalamus f-wt v1.0

Listing Annotated UniGenes

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Help Complete | Putative Complete | N-terminus | Putative N-terminus | Internal | C-terminus | Putative C-terminus | Coding | Putative Coding | Putative ncRNA | Misassembled | Unknown


Search: Containing in

Name Length
SoftwareDescriptionE-value
FL-next Status Origin of reads
hpt_f_wt_v1.0_unigene213 135
• AutoFact
ccdc104, MGC136497, zgc:136497; coiled-coil domain containing 104
6.0e-05
• FL-Next
tr=coiled-coil domain-containing protein 104; Salmo salar (Atlantic salmon).
0.0
• Sma3
coiled-coil domain-containing protein 104
5.425e-06
Putative C-terminus
hpt_f_wt_v1.0_unigene217 207
• AutoFact
Unassigned protein
0.0
• FL-Next
None-
• Sma3
None-
unknown
hpt_f_wt_v1.0_unigene218 189
• AutoFact
cytochrome c oxidase subunit 5B, mitochondrial n=6 Tax=Euteleostei RepID=C0H897_SALSA
9.0e-08
• FL-Next
tr=cytochrome c oxidase subunit 5B, mitochondrial; Esox lucius (Northern pike).
0.0
• Sma3
cytochrome c oxidase subunit 5B, mitochondrial
3.078e-14
N-terminus
hpt_f_wt_v1.0_unigene222 336
• AutoFact
RNA-directed DNA polymerase ; HMG-I and HMG-Y, DNA-binding, putative n=1 Tax=Medicago truncatula RepID=A2Q3E4_MEDTR
2.0e-18
• FL-Next
tr=Chromosome undetermined SCAF15016, whole genome shotgun sequence; Tetraodon nigroviridis (Green puffer).
0.0
• Sma3
Chromosome undetermined SCAF7642, whole genome shotgun sequence.
6.51e-06
Putative Complete
hpt_f_wt_v1.0_unigene224 409
• AutoFact
PREDICTED: probable E3 ubiquitin-protein ligase HECTD2-like n=1 Tax=Meleagris gallopavo RepID=UPI0002035CE5
0.0
• FL-Next
tr=Uncharacterized protein; Danio rerio (Zebrafish) (Brachydanio rerio).
0.0
• Sma3
None-
Internal
hpt_f_wt_v1.0_unigene225 236
• AutoFact
arhgef16; rho guanine nucleotide exchange factor (gef) 16
2.0e-14
• FL-Next
tr=Uncharacterized protein; Danio rerio (Zebrafish) (Brachydanio rerio).
0.0
• Sma3
Novel protein similar to vertebrate rho guanine exchange factor (gef) 16 (arhgef16)
6.2e-06
Internal
hpt_f_wt_v1.0_unigene228 321
• AutoFact
Unassigned protein
0.0
• FL-Next
tr=Chromosome undetermined SCAF15069, whole genome shotgun sequence; Tetraodon nigroviridis (Green puffer).
0.0
• Sma3
None-
C-terminus
hpt_f_wt_v1.0_unigene232 485
• AutoFact
gmp reductase n=3 Tax=Clupeocephala RepID=Q503G5_DANRE
0.0
• FL-Next
sp=gmp reductase; Danio rerio (Zebrafish) (Brachydanio rerio).
0.0
• Sma3
gmp reductase
0.0
C-terminus
hpt_f_wt_v1.0_unigene233 311
• AutoFact
ubiquitin-protein ligase (Fragment) n=1 Tax=Solanum nigrum RepID=F4YBC9_SOLNI
1.0e-16
• FL-Next
tr=ubiquitin-conjugating enzyme E2 D4; Salmo salar (Atlantic salmon).
0.0
• Sma3
ubiquitin-conjugating enzyme E2 D4
1.518e-08
N-terminus
hpt_f_wt_v1.0_unigene235 419
• AutoFact
Unassigned protein
0.0
• FL-Next
None-
• Sma3
None-
coding
hpt_f_wt_v1.0_unigene236 246
• AutoFact
ankyrin repeat and btb (poz) domain containing 1; K10520 ankyrin repeat and btb/poz domain-containing protein 1
7.0e-07
• FL-Next
tr=Uncharacterized protein; Danio rerio (Zebrafish) (Brachydanio rerio).
0.0
• Sma3
ankyrin repeat and btb (poz) domain containing 1
7.13e-06
N-terminus
hpt_f_wt_v1.0_unigene238 219
• AutoFact
PREDICTED: epoxide hydrolase 1-like n=1 Tax=Monodelphis domestica RepID=UPI00005E92D5
5.0e-13
• FL-Next
tr=Zgc:56126; Danio rerio (Zebrafish) (Brachydanio rerio).
0.0
• Sma3
Zgc:56126
6.045e-06
C-terminus
hpt_f_wt_v1.0_unigene239 354
• AutoFact
Unassigned protein
0.0
• FL-Next
tr=C6orf64 homolog; Esox lucius (Northern pike).
0.0
• Sma3
None-
N-terminus
hpt_f_wt_v1.0_unigene240 289
• AutoFact
icmt, im:6895697, zgc:110258; isoprenylcysteine carboxyl methyltransferase (EC:2.1.1.100); K00587 protein-S-isoprenylcysteine O-methyltransferase [EC:2.1.1.100]
2.0e-27
• FL-Next
tr=Chromosome undetermined SCAF7770, whole genome shotgun sequence; Tetraodon nigroviridis (Green puffer).
0.0
• Sma3
isoprenylcysteine carboxyl methyltransferase
1.626e-10
N-terminus
hpt_f_wt_v1.0_unigene244 230
• AutoFact
Unassigned protein
6.0e-06
• FL-Next
tr=C6orf162 homolog; Salmo salar (Atlantic salmon).
0.0
• Sma3
None-
N-terminus
hpt_f_wt_v1.0_unigene245 296
• AutoFact
hint3; histidine triad nucleotide binding protein 3 (EC:3.-.-.-)
1.0e-13
• FL-Next
tr=Histidine triad nucleotide-binding protein 3; Salmo salar (Atlantic salmon).
0.0
• Sma3
None-
Putative N-terminus
hpt_f_wt_v1.0_unigene246 409
• AutoFact
iron-responsive element-binding protein 1 n=1 Tax=Salmo salar RepID=B5X348_SALSA
1.4013e-45
• FL-Next
tr=iron-responsive element-binding protein 1; Salmo salar (Atlantic salmon).
0.0
• Sma3
iron-responsive element-binding protein 1
4.412e-10
C-terminus
hpt_f_wt_v1.0_unigene247 201
• AutoFact
Unassigned protein
0.0
• FL-Next
None-
• Sma3
None-
unknown
hpt_f_wt_v1.0_unigene248 367
• AutoFact
translocon-associated protein subunit delta n=8 Tax=Coelomata RepID=C1BKL7_OSMMO
1.0e-30
• FL-Next
tr=translocon-associated protein subunit delta; Epinephelus coioides (Orange-spotted grouper) (Epinephelus nebulosus).
0.0
• Sma3
translocon-associated protein subunit delta
2.009e-18
N-terminus
hpt_f_wt_v1.0_unigene250 432
• AutoFact
Gamma-aminobutyric acid receptor subunit gamma-2 n=25 Tax=Euteleostomi RepID=GBRG2_HUMAN
1.4013e-45
• FL-Next
tr=GABAa receptor gamma2 subunit; Morone americana (White perch) (Roccus americanus).
0.0
• Sma3
Glycine receptor, alpha 3
1.467e-07
Internal


Juntadeandalucia

IFAPA Centro El Toruño. Ctra. N. IV Km. 654a. Camino de Tiro Pichón. El Puerto de Santa María (Cádiz), Spain.
Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29590 Campanillas (Málaga), Spain