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Assembly Name: Hypothalamus f-wt v1.0

Listing Annotated UniGenes

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Help Complete | Putative Complete | N-terminus | Putative N-terminus | Internal | C-terminus | Putative C-terminus | Coding | Putative Coding | Putative ncRNA | Misassembled | Unknown


Search: Containing in

Name Length
SoftwareDescriptionE-value
FL-next Status Origin of reads
hpt_f_wt_v1.0_unigene119 218
• AutoFact
srrt, CHUNP6881, MGC92060, ars2, zgc:92060; serrate rna effector molecule homolog (Arabidopsis)
2.0e-15
• FL-Next
sp=Serrate rna effector molecule homolog; Danio rerio (Zebrafish) (Brachydanio rerio).
0.0
• Sma3
None-
Internal
hpt_f_wt_v1.0_unigene121 294
• AutoFact
gosr2, wu:fc33b02, zgc:64068; golgi snap receptor complex member 2; K08496 golgi snap receptor complex member 2
7.0e-23
• FL-Next
tr=golgi snap receptor complex member 2; Danio rerio (Zebrafish) (Brachydanio rerio).
0.0
• Sma3
golgi snap receptor complex member 2
4.546e-11
N-terminus
hpt_f_wt_v1.0_unigene122 427
• AutoFact
cathepsin L-like protein (Fragment) n=4 Tax=Percomorpha RepID=C3UWE1_9PERO
0.0
• FL-Next
tr=cathepsin L; Oplegnathus fasciatus (barred knifejaw).
0.0
• Sma3
cathepsin L
0.0
Internal
hpt_f_wt_v1.0_unigene123 274
• AutoFact
nipsnap homolog 3A [Xenopus laevis] gb|AAH60436.1| MGC68768 protein [Xenopus laevis]
5.0e-13
• FL-Next
tr=NipSnap homolog 3A; Salmo salar (Atlantic salmon).
0.0
• Sma3
Zgc:56466
6.51e-06
N-terminus
hpt_f_wt_v1.0_unigene124 291
• AutoFact
calcium/calmodulin-dependent protein kinase type II gamma chain n=3 Tax=Euteleostomi RepID=E6ZHR7_DICLA
2.00386e-43
• FL-Next
tr=calcium/calmodulin-dependent protein kinase type II gamma chain; Dicentrarchus labrax (European seabass) (Morone labrax).
0.0
• Sma3
calcium/calmodulin-dependent protein kinase (CaM kinase) II alpha
5.514e-12
C-terminus
hpt_f_wt_v1.0_unigene126 227
• AutoFact
trpc2; transient receptor potential cation channel, subfamily C, member 2; K04965 transient receptor potential cation channel subfamily C member 2
9.0e-18
• FL-Next
tr=Uncharacterized protein; Danio rerio (Zebrafish) (Brachydanio rerio).
0.0
• Sma3
transient receptor potential cation channel, subfamily C, member 2
1.194e-10
Internal
hpt_f_wt_v1.0_unigene127 154
• AutoFact
nadh dehydrogenase 1 beta subcomplex subunit 5, mitochondrial n=1 Tax=Anoplopoma fimbria RepID=C3KJT2_ANOFI
2.0e-06
• FL-Next
tr=nadh dehydrogenase 1 beta subcomplex subunit 5, mitochondrial; Anoplopoma fimbria (Sablefish).
0.0
• Sma3
nadh dehydrogenase 1 beta subcomplex subunit 5, mitochondrial
1.06e-10
N-terminus
hpt_f_wt_v1.0_unigene129 427
• AutoFact
PREDICTED: neurexophilin-2-like n=1 Tax=Anolis carolinensis RepID=UPI0002039FD2
0.0
• FL-Next
tr=Uncharacterized protein; Danio rerio (Zebrafish) (Brachydanio rerio).
0.0
• Sma3
Uncharacterized protein
2.551e-11
C-terminus
hpt_f_wt_v1.0_unigene133 266
• AutoFact
None-
• FL-Next
None-
• Sma3
Zgc:153675
2.79e-06
coding
hpt_f_wt_v1.0_unigene134 321
• AutoFact
MGC153596; zgc:153596
1.0e-25
• FL-Next
tr=C14orf138; Salmo salar (Atlantic salmon).
0.0
• Sma3
Methyltransferase like 21D
2.859e-11
N-terminus
hpt_f_wt_v1.0_unigene138 423
• AutoFact
Transcriptional repressor NF-X1 n=1 Tax=Dicentrarchus labrax RepID=E6ZJ69_DICLA
0.0
• FL-Next
tr=Transcriptional repressor NF-X1; Dicentrarchus labrax (European seabass) (Morone labrax).
0.0
• Sma3
None-
Internal
hpt_f_wt_v1.0_unigene142 333
• AutoFact
fb30h03, wu:fb30h03; zgc:85702
1.0e-24
• FL-Next
tr=Metalloprotease C21orf57; Salmo salar (Atlantic salmon).
0.0
• Sma3
YbeY metallopeptidase
1.063e-10
Putative N-terminus
hpt_f_wt_v1.0_unigene143 235
• AutoFact
zgc:77744 n=1 Tax=Danio rerio RepID=Q6NX05_DANRE
6.0e-19
• FL-Next
tr=Uncharacterized protein; Danio rerio (Zebrafish) (Brachydanio rerio).
0.0
• Sma3
zgc:77744
4.65e-06
Putative C-terminus
hpt_f_wt_v1.0_unigene144 417
• AutoFact
Unassigned protein
0.0
• FL-Next
tr=C3orf32; Salmo salar (Atlantic salmon).
0.0
• Sma3
Zgc:136895 protein
8.681e-06
C-terminus
hpt_f_wt_v1.0_unigene147 420
• AutoFact
Solute carrier family 32 (gaba vesicular transporter), member 1 n=3 Tax=Clupeocephala RepID=A1L1T3_DANRE
1.0e-21
• FL-Next
tr=Solute carrier family 32 (gaba vesicular transporter), member 1; Danio rerio (Zebrafish) (Brachydanio rerio).
0.0
• Sma3
vesicular inhibitory amino acid transporter
8.829e-15
C-terminus
hpt_f_wt_v1.0_unigene149 434
• AutoFact
Major histocompatibility complex II gamma chains n=1 Tax=Sparus aurata RepID=B2RFS6_SPAAU
5.0e-31
• FL-Next
tr=Major histocompatibility complex II gamma chains; Sparus aurata (Gilthead sea bream).
0.0
• Sma3
None-
C-terminus
hpt_f_wt_v1.0_unigene150 325
• AutoFact
Novel protein similar to vertebrate nadh dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 1 (ndufaf1, zgc:113197) n=2 Tax=Danio rerio RepID=Q5CZW0_DANRE
1.0e-33
• FL-Next
tr=Novel protein similar to vertebrate nadh dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 1 (ndufaf1, zgc:113197); Danio rerio (Zebrafish) (Brachydanio rerio).
0.0
• Sma3
nadh dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 1
8.506e-11
C-terminus
hpt_f_wt_v1.0_unigene151 209
• AutoFact
Unassigned protein
0.0
• FL-Next
tr=Activity-dependent neuroprotector homeobox protein; Dicentrarchus labrax (European seabass) (Morone labrax).
0.0
• Sma3
Activity-dependent neuroprotector homeobox protein
1.86e-06
Putative C-terminus
hpt_f_wt_v1.0_unigene156 390
• AutoFact
map2k4, MGC136500, MKK4, MKK4A-l, map2k4a, zgc:136500; mitogen-activated protein kinase kinase 4 (EC:2.7.1.-); K04430 mitogen-activated protein kinase kinase 4 [EC:2.7.12.2]
0.0
• FL-Next
tr=Chromosome 3 SCAF14679, whole genome shotgun sequence; Tetraodon nigroviridis (Green puffer).
0.0
• Sma3
mitogen-activated protein kinase kinase 4
4.928e-14
C-terminus
hpt_f_wt_v1.0_unigene159 482
• AutoFact
ppdpfa, c20orf149, c20orf149a, cb1048, fb65a03, id:ibd5154, wu:fb65a03, zgc:66181; pancreatic progenitor cell differentiation and proliferation factor a
1.0e-31
• FL-Next
sp=pancreatic progenitor cell differentiation and proliferation factor A; Danio rerio (Zebrafish) (Brachydanio rerio).
0.0
• Sma3
pancreatic progenitor cell differentiation and proliferation factor
0.0
Putative Complete


Juntadeandalucia

IFAPA Centro El Toruño. Ctra. N. IV Km. 654a. Camino de Tiro Pichón. El Puerto de Santa María (Cádiz), Spain.
Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29590 Campanillas (Málaga), Spain