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Assembly Name: Hypothalamus f-wt v1.0

Listing Annotated UniGenes

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Help Complete | Putative Complete | N-terminus | Putative N-terminus | Internal | C-terminus | Putative C-terminus | Coding | Putative Coding | Putative ncRNA | Misassembled | Unknown


Search: Containing in

Name Length
SoftwareDescriptionE-value
FL-next Status Origin of reads
hpt_f_wt_v1.0_unigene35 420
• AutoFact
keratin 18 (Fragment) n=1 Tax=Epinephelus coioides RepID=B3GPH2_EPICO
0.0
• FL-Next
tr=Chromosome undetermined SCAF14505, whole genome shotgun sequence; Tetraodon nigroviridis (Green puffer).
0.0
• Sma3
keratin, type I cytoskeletal 18
7.48e-29
Internal
hpt_f_wt_v1.0_unigene36 522
• AutoFact
Protein frg1 n=4 Tax=Tetraodontidae RepID=frg1_TAKRU
0.0
• FL-Next
tr=Chromosome 18 SCAF14485, whole genome shotgun sequence; Tetraodon nigroviridis (Green puffer).
0.0
• Sma3
frg1
1.095e-10
Internal
hpt_f_wt_v1.0_unigene38 682
• AutoFact
Unassigned protein
3.0e-06
• FL-Next
tr=Chromosome 16 SCAF10562, whole genome shotgun sequence; Tetraodon nigroviridis (Green puffer).
0.0
• Sma3
None-
Internal
hpt_f_wt_v1.0_unigene42 424
• AutoFact
lsm domain-containing protein 1 n=4 Tax=Euteleostei RepID=C1BXD3_ESOLU
2.0e-26
• FL-Next
tr=lsm domain-containing protein 1; Salmo salar (Atlantic salmon).
0.0
• Sma3
lsm domain-containing protein 1
6.949e-26
C-terminus
hpt_f_wt_v1.0_unigene43 498
• AutoFact
family with sequence similarity 69, member A-like
1.0e-17
• FL-Next
tr=Chromosome 1 SCAF14770, whole genome shotgun sequence; Tetraodon nigroviridis (Green puffer).
0.0
• Sma3
family with sequence similarity 69, member B
2.574e-14
C-terminus
hpt_f_wt_v1.0_unigene44 287
• AutoFact
signal recognition particle receptor subunit beta n=1 Tax=Anoplopoma fimbria RepID=C3KJV7_ANOFI
7.0e-26
• FL-Next
tr=signal recognition particle receptor subunit beta; Anoplopoma fimbria (Sablefish).
0.0
• Sma3
signal recognition particle receptor subunit beta
2.623e-24
C-terminus
hpt_f_wt_v1.0_unigene45 448
• AutoFact
glutathione S-transferase theta b n=1 Tax=Oplegnathus fasciatus RepID=F1AQ81_9PERO
0.0
• FL-Next
tr=glutathione S-transferase theta b; Oplegnathus fasciatus (barred knifejaw).
0.0
• Sma3
glutathione S-transferase theta-1
1.62551e-43
Internal
hpt_f_wt_v1.0_unigene50 171
• AutoFact
optic atrophy 3 protein n=1 Tax=Osmerus mordax RepID=C1BKV0_OSMMO
3.0e-16
• FL-Next
tr=optic atrophy 3 protein; Osmerus mordax (Rainbow smelt) (Atherina mordax).
0.0
• Sma3
optic atrophy 3 protein homolog
2.859e-11
N-terminus
hpt_f_wt_v1.0_unigene51 299
• AutoFact
gprc5c, zgc:171736; G protein-coupled receptor, family C, group 5, member C; K04620 G protein-coupled receptor family C group 5 member C
9.0e-20
• FL-Next
tr=Uncharacterized protein; Danio rerio (Zebrafish) (Brachydanio rerio).
0.0
• Sma3
gprc5c protein
4.948e-10
Internal
hpt_f_wt_v1.0_unigene55 304
• AutoFact
nadh dehydrogenase iron-sulfur protein 4, mitochondrial n=1 Tax=Esox lucius RepID=C1BZJ0_ESOLU
6.0e-28
• FL-Next
tr=Chromosome 12 SCAF14999, whole genome shotgun sequence; Tetraodon nigroviridis (Green puffer).
0.0
• Sma3
nadh dehydrogenase iron-sulfur protein 4, mitochondrial
1.082e-09
N-terminus
hpt_f_wt_v1.0_unigene57 315
• AutoFact
agk, fi38e09, mulk, wu:fi38e09, zgc:55462; acylglycerol kinase (EC:2.7.1.107 2.7.1.94); K09881 acylglycerol kinase [EC:2.7.1.94]
7.0e-10
• FL-Next
tr=acylglycerol kinase, mitochondrial; Salmo salar (Atlantic salmon).
0.0
• Sma3
acylglycerol kinase, mitochondrial
2.616e-15
Internal
hpt_f_wt_v1.0_unigene58 209
• AutoFact
nagk; N-acetylglucosamine kinase (EC:2.7.1.59); K00884 N-acetylglucosamine kinase [EC:2.7.1.59]
9.0e-20
• FL-Next
tr=N-acetylglucosamine kinase; Esox lucius (Northern pike).
0.0
• Sma3
N-acetylglucosamine kinase
2.696e-11
N-terminus
hpt_f_wt_v1.0_unigene61 228
• AutoFact
alpha-1,3-fucosyltransferase n=2 Tax=Osmerus mordax RepID=C1BK46_OSMMO
3.0e-21
• FL-Next
tr=alpha-1,3-fucosyltransferase; Osmerus mordax (Rainbow smelt) (Atherina mordax).
0.0
• Sma3
alpha-1,3-fucosyltransferase
1.406e-08
C-terminus
hpt_f_wt_v1.0_unigene65 463
• AutoFact
isopentenyl-diphosphate delta-isomerase 1 n=2 Tax=Percomorpha RepID=E6ZI78_DICLA
0.0
• FL-Next
tr=isopentenyl-diphosphate delta-isomerase 1; Dicentrarchus labrax (European seabass) (Morone labrax).
0.0
• Sma3
isopentenyl-diphosphate delta-isomerase 1
3.489e-10
C-terminus
hpt_f_wt_v1.0_unigene67 343
• AutoFact
potassium channel Kv1.2a n=2 Tax=Clupeocephala RepID=Q1HL11_9TELE
1.96182e-44
• FL-Next
tr=potassium voltage-gated channel subfamily A member 2; Dicentrarchus labrax (European seabass) (Morone labrax).
0.0
• Sma3
potassium voltage-gated channel subfamily A member 2
1.223e-15
C-terminus
hpt_f_wt_v1.0_unigene68 423
• AutoFact
cb268, sb:cb268; si:dkey-236e20.6
3.0e-38
• FL-Next
tr=Novel protein; Danio rerio (Zebrafish) (Brachydanio rerio).
0.0
• Sma3
None-
Internal
hpt_f_wt_v1.0_unigene70 241
• AutoFact
MGC66426; zgc:66426
1.0e-13
• FL-Next
tr=Zgc:66426; Danio rerio (Zebrafish) (Brachydanio rerio).
0.0
• Sma3
Sperm flagellar protein 1
4.65e-06
Putative C-terminus
hpt_f_wt_v1.0_unigene73 311
• AutoFact
DUF566 domain containing protein
5.0e-06
• FL-Next
tr=Uncharacterized protein; Danio rerio (Zebrafish) (Brachydanio rerio).
0.0
• Sma3
None-
Putative N-terminus
hpt_f_wt_v1.0_unigene75 352
• AutoFact
gnl2, MGC174441, MGC65800, MGC77319, wu:fc15c12, zgc:65800, zgc:77319; guanine nucleotide binding protein-like 2 (nucleolar)
2.0e-15
• FL-Next
tr=nucleolar gtp-binding protein 2; Salmo salar (Atlantic salmon).
0.0
• Sma3
nucleolar gtp-binding protein 2
4.974e-11
Internal
hpt_f_wt_v1.0_unigene76 322
• AutoFact
ras protein-specific guanine nucleotide-releasing factor 1-like
0.0
• FL-Next
tr=Uncharacterized protein; Danio rerio (Zebrafish) (Brachydanio rerio).
0.0
• Sma3
ras protein-specific guanine nucleotide-releasing factor 2
1.719e-09
C-terminus


Juntadeandalucia

IFAPA Centro El Toruño. Ctra. N. IV Km. 654a. Camino de Tiro Pichón. El Puerto de Santa María (Cádiz), Spain.
Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29590 Campanillas (Málaga), Spain