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Assembly Name: Hypothalamus f-wt v1.0

Listing Internal UniGenes

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Help Complete | Putative Complete | N-terminus | Putative N-terminus | Internal | C-terminus | Putative C-terminus | Coding | Putative Coding | Putative ncRNA | Misassembled | Unknown


Search: Containing in

Name Length
SoftwareDescriptionE-value
FL-next Status Origin of reads
hpt_f_wt_v1.0_unigene3 417
• AutoFact
28S ribosomal protein s31, mitochondrial n=1 Tax=Salmo salar RepID=B5X2G7_SALSA
1.0e-37
• FL-Next
tr=28S ribosomal protein s31, mitochondrial; Salmo salar (Atlantic salmon).
0.0
• Sma3
mitochondrial ribosomal protein s31
1.562e-11
Internal
hpt_f_wt_v1.0_unigene6 445
• AutoFact
mettl2a, MGC110598, zgc:110598; methyltransferase like 2A (EC:2.1.1.-)
0.0
• FL-Next
tr=methyltransferase-like protein 2; Osmerus mordax (Rainbow smelt) (Atherina mordax).
0.0
• Sma3
methyltransferase-like protein 2
8.963e-19
Internal
hpt_f_wt_v1.0_unigene7 490
• AutoFact
Unassigned protein
0.0
• FL-Next
tr=Uncharacterized protein; Danio rerio (Zebrafish) (Brachydanio rerio).
0.0
• Sma3
None-
Internal
hpt_f_wt_v1.0_unigene15 472
• AutoFact
Neuron navigator 1 n=1 Tax=Dicentrarchus labrax RepID=E6ZEY4_DICLA
0.0
• FL-Next
tr=Uncharacterized protein; Danio rerio (Zebrafish) (Brachydanio rerio).
0.0
• Sma3
Uncharacterized protein
7.092e-10
Internal
hpt_f_wt_v1.0_unigene16 368
• AutoFact
dynactin subunit 2 n=1 Tax=Salmo salar RepID=B5X3R2_SALSA
0.0
• FL-Next
tr=dynactin subunit 2; Dicentrarchus labrax (European seabass) (Morone labrax).
0.0
• Sma3
dynactin subunit 2
1.651e-24
Internal
hpt_f_wt_v1.0_unigene17 404
• AutoFact
arginine/serine-rich coiled-coil protein 2 n=1 Tax=Danio rerio RepID=RSRC2_DANRE
0.0
• FL-Next
sp=arginine/serine-rich coiled-coil protein 2; Danio rerio (Zebrafish) (Brachydanio rerio).
0.0
• Sma3
arginine/serine-rich coiled-coil protein 2
1.337e-16
Internal
hpt_f_wt_v1.0_unigene34 359
• AutoFact
heme oxygenase (decyclizing) 2-like
9.0e-36
• FL-Next
tr=Uncharacterized protein; Danio rerio (Zebrafish) (Brachydanio rerio).
0.0
• Sma3
None-
Internal
hpt_f_wt_v1.0_unigene35 420
• AutoFact
keratin 18 (Fragment) n=1 Tax=Epinephelus coioides RepID=B3GPH2_EPICO
0.0
• FL-Next
tr=Chromosome undetermined SCAF14505, whole genome shotgun sequence; Tetraodon nigroviridis (Green puffer).
0.0
• Sma3
keratin, type I cytoskeletal 18
7.48e-29
Internal
hpt_f_wt_v1.0_unigene36 522
• AutoFact
Protein frg1 n=4 Tax=Tetraodontidae RepID=frg1_TAKRU
0.0
• FL-Next
tr=Chromosome 18 SCAF14485, whole genome shotgun sequence; Tetraodon nigroviridis (Green puffer).
0.0
• Sma3
frg1
1.095e-10
Internal
hpt_f_wt_v1.0_unigene38 682
• AutoFact
Unassigned protein
3.0e-06
• FL-Next
tr=Chromosome 16 SCAF10562, whole genome shotgun sequence; Tetraodon nigroviridis (Green puffer).
0.0
• Sma3
None-
Internal
hpt_f_wt_v1.0_unigene45 448
• AutoFact
glutathione S-transferase theta b n=1 Tax=Oplegnathus fasciatus RepID=F1AQ81_9PERO
0.0
• FL-Next
tr=glutathione S-transferase theta b; Oplegnathus fasciatus (barred knifejaw).
0.0
• Sma3
glutathione S-transferase theta-1
1.62551e-43
Internal
hpt_f_wt_v1.0_unigene51 299
• AutoFact
gprc5c, zgc:171736; G protein-coupled receptor, family C, group 5, member C; K04620 G protein-coupled receptor family C group 5 member C
9.0e-20
• FL-Next
tr=Uncharacterized protein; Danio rerio (Zebrafish) (Brachydanio rerio).
0.0
• Sma3
gprc5c protein
4.948e-10
Internal
hpt_f_wt_v1.0_unigene57 315
• AutoFact
agk, fi38e09, mulk, wu:fi38e09, zgc:55462; acylglycerol kinase (EC:2.7.1.107 2.7.1.94); K09881 acylglycerol kinase [EC:2.7.1.94]
7.0e-10
• FL-Next
tr=acylglycerol kinase, mitochondrial; Salmo salar (Atlantic salmon).
0.0
• Sma3
acylglycerol kinase, mitochondrial
2.616e-15
Internal
hpt_f_wt_v1.0_unigene68 423
• AutoFact
cb268, sb:cb268; si:dkey-236e20.6
3.0e-38
• FL-Next
tr=Novel protein; Danio rerio (Zebrafish) (Brachydanio rerio).
0.0
• Sma3
None-
Internal
hpt_f_wt_v1.0_unigene75 352
• AutoFact
gnl2, MGC174441, MGC65800, MGC77319, wu:fc15c12, zgc:65800, zgc:77319; guanine nucleotide binding protein-like 2 (nucleolar)
2.0e-15
• FL-Next
tr=nucleolar gtp-binding protein 2; Salmo salar (Atlantic salmon).
0.0
• Sma3
nucleolar gtp-binding protein 2
4.974e-11
Internal
hpt_f_wt_v1.0_unigene78 327
• AutoFact
similar to solute carrier family 39 (metal ion transporter), member 8
9.94922e-44
• FL-Next
tr=Zinc transporter LIV1; Danio rerio (Zebrafish) (Brachydanio rerio).
0.0
• Sma3
solute carrier family 39 (zinc transporter), member 10
1.015e-09
Internal
hpt_f_wt_v1.0_unigene82 430
• AutoFact
abcc2, MGC66072, zgc:66072; ATP-binding cassette, sub-family C (CFTR/MRP), member 2; K05666 ATP-binding cassette, subfamily C (CFTR/MRP), member 2
0.0
• FL-Next
tr=Multidrug resistance associated protein 2; Oncorhynchus mykiss (Rainbow trout) (Salmo gairdneri).
0.0
• Sma3
Multidrug resistance-associated protein 2
9.493e-12
Internal
hpt_f_wt_v1.0_unigene98 235
• AutoFact
lim domain transcription factor lmo4 n=1 Tax=Osmerus mordax RepID=C1BM33_OSMMO
4.0e-38
• FL-Next
tr=lim domain transcription factor lmo4; Osmerus mordax (Rainbow smelt) (Atherina mordax).
0.0
• Sma3
lim domain transcription factor lmo4.1
1.065e-09
Internal
hpt_f_wt_v1.0_unigene109 413
• AutoFact
gpatch8, fa12a04, gpatc8, wu:fa12a04; G patch domain containing 8
6.0e-17
• FL-Next
tr=Uncharacterized protein; Danio rerio (Zebrafish) (Brachydanio rerio).
0.0
• Sma3
LOC565404 protein
3.561e-11
Internal
hpt_f_wt_v1.0_unigene110 449
• AutoFact
PREDICTED: ras GTPase-activating protein 2-like n=1 Tax=Danio rerio RepID=UPI00020278AC
1.0e-18
• FL-Next
tr=Uncharacterized protein; Danio rerio (Zebrafish) (Brachydanio rerio).
0.0
• Sma3
None-
Internal


Juntadeandalucia

IFAPA Centro El Toruño. Ctra. N. IV Km. 654a. Camino de Tiro Pichón. El Puerto de Santa María (Cádiz), Spain.
Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29590 Campanillas (Málaga), Spain