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Assembly Name: Hypothalamus f-wt v1.0

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Help Complete | Putative Complete | N-terminus | Putative N-terminus | Internal | C-terminus | Putative C-terminus | Coding | Putative Coding | Putative ncRNA | Misassembled | Unknown


Search: Containing in

Name Length
SoftwareDescriptionE-value
FL-next Status Origin of reads
hpt_f_wt_v1.0_unigene1 474
• AutoFact
Zgc:91975 n=1 Tax=Danio rerio RepID=Q68EH0_DANRE
0.0
• FL-Next
tr=Uncharacterized protein; Danio rerio (Zebrafish) (Brachydanio rerio).
0.0
• Sma3
G1 to S phase transition 1
4.356e-14
C-terminus
hpt_f_wt_v1.0_unigene2 280
• AutoFact
None-
• FL-Next
None-
• Sma3
None-
unknown
hpt_f_wt_v1.0_unigene3 417
• AutoFact
28S ribosomal protein s31, mitochondrial n=1 Tax=Salmo salar RepID=B5X2G7_SALSA
1.0e-37
• FL-Next
tr=28S ribosomal protein s31, mitochondrial; Salmo salar (Atlantic salmon).
0.0
• Sma3
mitochondrial ribosomal protein s31
1.562e-11
Internal
hpt_f_wt_v1.0_unigene4 309
• AutoFact
None-
• FL-Next
None-
• Sma3
None-
unknown
hpt_f_wt_v1.0_unigene5 566
• AutoFact
None-
• FL-Next
None-
• Sma3
None-
unknown
hpt_f_wt_v1.0_unigene6 445
• AutoFact
mettl2a, MGC110598, zgc:110598; methyltransferase like 2A (EC:2.1.1.-)
0.0
• FL-Next
tr=methyltransferase-like protein 2; Osmerus mordax (Rainbow smelt) (Atherina mordax).
0.0
• Sma3
methyltransferase-like protein 2
8.963e-19
Internal
hpt_f_wt_v1.0_unigene7 490
• AutoFact
Unassigned protein
0.0
• FL-Next
tr=Uncharacterized protein; Danio rerio (Zebrafish) (Brachydanio rerio).
0.0
• Sma3
None-
Internal
hpt_f_wt_v1.0_unigene8 459
• AutoFact
Baculoviral iap repeat-containing protein 4 n=1 Tax=Salmo salar RepID=C0HAV7_SALSA
1.00053e-42
• FL-Next
tr=Baculoviral iap repeat-containing protein 4; Salmo salar (Atlantic salmon).
0.0
• Sma3
X-linked inhibitor of apoptosis
4.974e-10
C-terminus
hpt_f_wt_v1.0_unigene9 748
• AutoFact
neurexin 1a alpha n=3 Tax=Danio rerio RepID=A1XQX0_DANRE
0.0
• FL-Next
tr=Chromosome 17 SCAF15006, whole genome shotgun sequence; Tetraodon nigroviridis (Green puffer).
0.0
• Sma3
neurexin 3a
1.623e-08
N-terminus
hpt_f_wt_v1.0_unigene10 316
• AutoFact
None-
• FL-Next
None-
• Sma3
None-
unknown
hpt_f_wt_v1.0_unigene11 286
• AutoFact
None-
• FL-Next
None-
• Sma3
None-
unknown
hpt_f_wt_v1.0_unigene12 409
• AutoFact
translationally-controlled tumor protein n=1 Tax=Oryzias latipes RepID=C3V6N1_ORYLA
3.0e-32
• FL-Next
tr=translationally-controlled tumor protein; Oryzias latipes (Medaka fish) (Japanese ricefish).
0.0
• Sma3
translationally-controlled tumor protein
3.976e-38
C-terminus
hpt_f_wt_v1.0_unigene13 443
• AutoFact
mediator of rna polymerase II transcription subunit 10 n=11 Tax=Coelomata RepID=MED10_DANRE
3.9937e-43
• FL-Next
tr=mediator of rna polymerase II transcription subunit 10; Anoplopoma fimbria (Sablefish).
0.0
• Sma3
mediator of rna polymerase II transcription subunit 10
3.111e-14
C-terminus
hpt_f_wt_v1.0_unigene14 407
• AutoFact
None-
• FL-Next
None-
• Sma3
None-
unknown
hpt_f_wt_v1.0_unigene15 472
• AutoFact
Neuron navigator 1 n=1 Tax=Dicentrarchus labrax RepID=E6ZEY4_DICLA
0.0
• FL-Next
tr=Uncharacterized protein; Danio rerio (Zebrafish) (Brachydanio rerio).
0.0
• Sma3
Uncharacterized protein
7.092e-10
Internal
hpt_f_wt_v1.0_unigene16 368
• AutoFact
dynactin subunit 2 n=1 Tax=Salmo salar RepID=B5X3R2_SALSA
0.0
• FL-Next
tr=dynactin subunit 2; Dicentrarchus labrax (European seabass) (Morone labrax).
0.0
• Sma3
dynactin subunit 2
1.651e-24
Internal
hpt_f_wt_v1.0_unigene17 404
• AutoFact
arginine/serine-rich coiled-coil protein 2 n=1 Tax=Danio rerio RepID=RSRC2_DANRE
0.0
• FL-Next
sp=arginine/serine-rich coiled-coil protein 2; Danio rerio (Zebrafish) (Brachydanio rerio).
0.0
• Sma3
arginine/serine-rich coiled-coil protein 2
1.337e-16
Internal
hpt_f_wt_v1.0_unigene18 501
• AutoFact
Unassigned protein
2.0e-26
• FL-Next
tr=Uncharacterized protein; Dicentrarchus labrax (European seabass) (Morone labrax).
0.0
• Sma3
Uncharacterized protein
0.0
Complete
hpt_f_wt_v1.0_unigene19 286
• AutoFact
None-
• FL-Next
None-
• Sma3
None-
unknown
hpt_f_wt_v1.0_unigene20 297
• AutoFact
histidyl-trna synthetase, cytoplasmic-like
3.0e-20
• FL-Next
sp=histidyl-trna synthetase, cytoplasmic; Takifugu rubripes (Japanese pufferfish) (Fugu rubripes).
0.0
• Sma3
histidyl-trna synthetase
2.224e-13
Putative C-terminus


Juntadeandalucia

IFAPA Centro El Toruño. Ctra. N. IV Km. 654a. Camino de Tiro Pichón. El Puerto de Santa María (Cádiz), Spain.
Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29590 Campanillas (Málaga), Spain