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Assembly Name: Hypothalamus m-wt v1.0

Listing Annotated UniGenes

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Help Complete | Putative Complete | N-terminus | Putative N-terminus | Internal | C-terminus | Putative C-terminus | Coding | Putative Coding | Putative ncRNA | Misassembled | Unknown


Search: Containing in

Name Length
SoftwareDescriptionE-value
FL-next Status Origin of reads
hpt_m_wt_v1.0_unigene248 311
• AutoFact
Unassigned protein
0.0
• FL-Next
tr=Chromosome undetermined SCAF8850, whole genome shotgun sequence; Tetraodon nigroviridis (Green puffer).
0.0
• Sma3
Microtubule-associated protein 1Aa
4.03e-06
Internal
hpt_m_wt_v1.0_unigene257 850
• AutoFact
Hid1 multi-domain protein
0.0
• FL-Next
tr=Zgc:100980; Danio rerio (Zebrafish) (Brachydanio rerio).
0.0
• Sma3
Zgc:100980
5.89e-06
C-terminus
hpt_m_wt_v1.0_unigene262 446
• AutoFact
Ifi-6-16 multi-domain protein
3.0e-34
• FL-Next
None-
• Sma3
Novel protein with a Interferon-induced 6-16 family domain
6.393e-27
coding
hpt_m_wt_v1.0_unigene265 229
• AutoFact
PREDICTED: karyopherin alpha 4 isoform 1 n=1 Tax=Pan troglodytes RepID=UPI0000412CC0
2.0e-34
• FL-Next
tr=karyopherin alpha 4 (importin alpha 3); Danio rerio (Zebrafish) (Brachydanio rerio).
0.0
• Sma3
karyopherin alpha 3 (importin alpha 4)
3.245e-09
Internal
hpt_m_wt_v1.0_unigene269 237
• AutoFact
Unassigned protein
0.0
• FL-Next
tr=Chromosome 5 SCAF14581, whole genome shotgun sequence; Tetraodon nigroviridis (Green puffer).
0.0
• Sma3
None-
C-terminus
hpt_m_wt_v1.0_unigene271 472
• AutoFact
PREDICTED: nuclear receptor subfamily 2, group F, member 2 n=4 Tax=Euteleostomi RepID=UPI000194DFCC
0.0
• FL-Next
sp=Nuclear receptor subfamily 2 group F member 1-A; Danio rerio (Zebrafish) (Brachydanio rerio).
0.0
• Sma3
Retinoid X receptor gamma
3.832e-11
C-terminus
hpt_m_wt_v1.0_unigene272 391
• AutoFact
Phospholipase C-beta 2 n=2 Tax=Oryzias latipes RepID=Q08JX0_ORYLA
1.0e-24
• FL-Next
tr=Phospholipase C-beta 2; Oryzias latipes (Medaka fish) (Japanese ricefish).
0.0
• Sma3
None-
Putative C-terminus
hpt_m_wt_v1.0_unigene273 532
• AutoFact
pbxip1b, MGC158151, im:7138234, wu:fb12b01, zgc:158151; pre-B-cell leukemia homeobox interacting protein 1b
9.0e-26
• FL-Next
tr=Chromosome 8 SCAF15044, whole genome shotgun sequence; Tetraodon nigroviridis (Green puffer).
0.0
• Sma3
zgc:158151
2.48e-06
Internal
hpt_m_wt_v1.0_unigene275 637
• AutoFact
Unassigned protein
0.0
• FL-Next
tr=Chromosome 9 SCAF14991, whole genome shotgun sequence; Tetraodon nigroviridis (Green puffer).
0.0
• Sma3
None-
C-terminus
hpt_m_wt_v1.0_unigene286 364
• AutoFact
RMND1; required for meiotic nuclear division 1 homolog (S. cerevisiae)
1.0e-32
• FL-Next
tr=required for meiotic nuclear division 1 homolog (S. cerevisiae); Danio rerio (Zebrafish) (Brachydanio rerio).
0.0
• Sma3
required for meiotic nuclear division 1 homolog
4.185e-06
Internal
hpt_m_wt_v1.0_unigene287 296
• AutoFact
Cytoplasmic dynein 1 intermediate chain 1 (Fragment) n=1 Tax=Salmo salar RepID=C0PU47_SALSA
2.0e-17
• FL-Next
tr=Uncharacterized protein; Danio rerio (Zebrafish) (Brachydanio rerio).
0.0
• Sma3
None-
C-terminus
hpt_m_wt_v1.0_unigene293 374
• AutoFact
inhibitor of growth protein 4 n=5 Tax=Euteleostei RepID=B5X938_SALSA
0.0
• FL-Next
tr=inhibitor of growth protein 4; Anoplopoma fimbria (Sablefish).
0.0
• Sma3
inhibitor of growth protein 4
8.555e-09
C-terminus
hpt_m_wt_v1.0_unigene295 379
• AutoFact
ephb1, ephb1-a, xek; EPH receptor B1 (EC:2.7.10.1); K05110 Eph receptor B1 [EC:2.7.10.1]
1.0e-23
• FL-Next
tr=Chromosome 15 SCAF14992, whole genome shotgun sequence; Tetraodon nigroviridis (Green puffer).
0.0
• Sma3
Ephrin type-B receptor 1
6.608e-08
C-terminus
hpt_m_wt_v1.0_unigene297 313
• AutoFact
Novel protein (Zgc:55620) n=3 Tax=Danio rerio RepID=A8DZJ0_DANRE
6.0e-12
• FL-Next
tr=Tubulin folding cofactor B; Danio rerio (Zebrafish) (Brachydanio rerio).
0.0
• Sma3
Tubulin folding cofactor B
3.176e-15
N-terminus
hpt_m_wt_v1.0_unigene300 200
• AutoFact
None-
• FL-Next
None-
• Sma3
28 kDa heat-and acid-stable phosphoprotein
1.43e-10
unknown
hpt_m_wt_v1.0_unigene301 348
• AutoFact
coiled-coil domain-containing protein 12 n=4 Tax=Salmoninae RepID=B5X5R1_SALSA
4.0e-29
• FL-Next
tr=Chromosome 8 SCAF15044, whole genome shotgun sequence; Tetraodon nigroviridis (Green puffer).
0.0
• Sma3
coiled-coil domain containing 12
1.427e-10
N-terminus
hpt_m_wt_v1.0_unigene302 487
• AutoFact
lysyl-trna synthetase n=3 Tax=Danio rerio RepID=Q6DHE6_DANRE
0.0
• FL-Next
sp=lysyl-trna synthetase; Danio rerio (Zebrafish) (Brachydanio rerio).
0.0
• Sma3
lysyl-trna synthetase
1.88e-32
C-terminus
hpt_m_wt_v1.0_unigene303 399
• AutoFact
cathepsin D n=1 Tax=hippoglossus hippoglossus RepID=Q06BU6_HIPHI
0.0
• FL-Next
tr=cathepsin D; hippoglossus).
0.0
• Sma3
cathepsin D
0.0
Internal
hpt_m_wt_v1.0_unigene305 227
• AutoFact
enhancer of yellow 2 transcription factor homolog n=1 Tax=Esox lucius RepID=C1BWN3_ESOLU
4.0e-15
• FL-Next
tr=enhancer of yellow 2 transcription factor homolog; Esox lucius (Northern pike).
0.0
• Sma3
enhancer of yellow 2 transcription factor homolog
2.524e-24
N-terminus
hpt_m_wt_v1.0_unigene307 457
• AutoFact
adp ribosylation factor 102F (Fragment) n=1 Tax=Amblyomma variegatum RepID=F0J9E9_AMBVA
1.0e-11
• FL-Next
tr=adp-ribosylation factor 5; Danio rerio (Zebrafish) (Brachydanio rerio).
0.0
• Sma3
adp-ribosylation factor 4
1.9e-15
C-terminus


Juntadeandalucia

IFAPA Centro El Toruño. Ctra. N. IV Km. 654a. Camino de Tiro Pichón. El Puerto de Santa María (Cádiz), Spain.
Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29590 Campanillas (Málaga), Spain